Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTN3Q9P232 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTN3Q9P232 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTN3Q9P232 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTN3Q9P232 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CNTN3Q9P232 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 MKNK2P1-201ENST00000437526 628 ntBASIC18.35■□□□□ 0.53
CNTN3Q9P232 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.35■□□□□ 0.53
CNTN3Q9P232 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTN3Q9P232 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.35■□□□□ 0.53
CNTN3Q9P232 AC005412.3-201ENST00000580309 715 ntBASIC18.35■□□□□ 0.53
CNTN3Q9P232 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CNTN3Q9P232 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CNTN3Q9P232 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTN3Q9P232 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTN3Q9P232 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTN3Q9P232 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTN3Q9P232 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTN3Q9P232 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTN3Q9P232 AC009053.2-201ENST00000563701 2365 ntBASIC18.34■□□□□ 0.53
CNTN3Q9P232 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTN3Q9P232 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTN3Q9P232 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTN3Q9P232 TOP3BP1-201ENST00000420768 1380 ntBASIC18.34■□□□□ 0.53
CNTN3Q9P232 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTN3Q9P232 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTN3Q9P232 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTN3Q9P232 AC124947.2-201ENST00000547118 1133 ntBASIC18.34■□□□□ 0.53
CNTN3Q9P232 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTN3Q9P232 AC068137.2-201ENST00000605408 478 ntBASIC18.34■□□□□ 0.53
CNTN3Q9P232 AL078644.1-201ENST00000609881 752 ntBASIC18.34■□□□□ 0.53
CNTN3Q9P232 AL645728.2-201ENST00000641974 660 ntBASIC18.34■□□□□ 0.53
CNTN3Q9P232 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTN3Q9P232 AC141586.5-201ENST00000624546 2050 ntBASIC18.34■□□□□ 0.53
CNTN3Q9P232 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.33■□□□□ 0.53
CNTN3Q9P232 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNTN3Q9P232 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNTN3Q9P232 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNTN3Q9P232 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.33■□□□□ 0.53
CNTN3Q9P232 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNTN3Q9P232 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.33■□□□□ 0.52
CNTN3Q9P232 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTN3Q9P232 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.33■□□□□ 0.52
CNTN3Q9P232 HTR5BP-201ENST00000430851 1154 ntBASIC18.33■□□□□ 0.52
CNTN3Q9P232 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNTN3Q9P232 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.33■□□□□ 0.52
CNTN3Q9P232 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTN3Q9P232 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTN3Q9P232 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
CNTN3Q9P232 MIR4515-201ENST00000584082 81 ntBASIC18.33■□□□□ 0.52
CNTN3Q9P232 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTN3Q9P232 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.33■□□□□ 0.52
CNTN3Q9P232 AL691403.2-201ENST00000618460 490 ntBASIC18.33■□□□□ 0.52
CNTN3Q9P232 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTN3Q9P232 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTN3Q9P232 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTN3Q9P232 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTN3Q9P232 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTN3Q9P232 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTN3Q9P232 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CNTN3Q9P232 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms