Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VAPAQ9P0L0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
VAPAQ9P0L0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.22■□□□□ 0.19
VAPAQ9P0L0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VAPAQ9P0L0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VAPAQ9P0L0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.22■□□□□ 0.19
VAPAQ9P0L0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.22■□□□□ 0.19
VAPAQ9P0L0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VAPAQ9P0L0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.22■□□□□ 0.19
VAPAQ9P0L0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VAPAQ9P0L0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 AC003669.1-201ENST00000334569 611 ntBASIC16.21■□□□□ 0.19
VAPAQ9P0L0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 AC091607.1-201ENST00000490318 1060 ntBASIC16.21■□□□□ 0.19
VAPAQ9P0L0 AC009533.2-201ENST00000543664 586 ntBASIC16.21■□□□□ 0.19
VAPAQ9P0L0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 AC011498.5-201ENST00000592027 486 ntBASIC16.21■□□□□ 0.19
VAPAQ9P0L0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.21■□□□□ 0.19
VAPAQ9P0L0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.21■□□□□ 0.19
VAPAQ9P0L0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VAPAQ9P0L0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
VAPAQ9P0L0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.21■□□□□ 0.18
VAPAQ9P0L0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.21■□□□□ 0.18
VAPAQ9P0L0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
VAPAQ9P0L0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
VAPAQ9P0L0 AL391256.1-201ENST00000443260 1855 ntBASIC16.2■□□□□ 0.18
VAPAQ9P0L0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 KLF4P1-201ENST00000412782 1185 ntBASIC16.2■□□□□ 0.18
VAPAQ9P0L0 AC246785.2-201ENST00000432512 513 ntBASIC16.2■□□□□ 0.18
VAPAQ9P0L0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 AC022616.7-201ENST00000525383 220 ntBASIC16.2■□□□□ 0.18
VAPAQ9P0L0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPAQ9P0L0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.19■□□□□ 0.18
VAPAQ9P0L0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.19■□□□□ 0.18
VAPAQ9P0L0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPAQ9P0L0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPAQ9P0L0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VAPAQ9P0L0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.19■□□□□ 0.18
VAPAQ9P0L0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPAQ9P0L0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPAQ9P0L0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms