Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDE1Q9NXR1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NDE1Q9NXR1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDE1Q9NXR1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDE1Q9NXR1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.64■□□□□ 0.25
NDE1Q9NXR1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NDE1Q9NXR1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NDE1Q9NXR1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
NDE1Q9NXR1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NDE1Q9NXR1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDE1Q9NXR1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDE1Q9NXR1 AC092364.2-201ENST00000596710 2692 ntBASIC16.63■□□□□ 0.25
NDE1Q9NXR1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 AC024563.2-201ENST00000603282 481 ntBASIC16.63■□□□□ 0.25
NDE1Q9NXR1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NDE1Q9NXR1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 AC092384.3-202ENST00000564646 2873 ntBASIC16.62■□□□□ 0.25
NDE1Q9NXR1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 KRT18P6-201ENST00000555540 1265 ntBASIC16.62■□□□□ 0.25
NDE1Q9NXR1 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.62■□□□□ 0.25
NDE1Q9NXR1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDE1Q9NXR1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms