Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 AP002414.1-201ENST00000391405 1147 ntBASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 MRPL3P1-201ENST00000400109 1033 ntBASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 KRT18P27-201ENST00000427733 1299 ntBASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 AC012640.2-201ENST00000561606 901 ntBASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 AL121894.2-201ENST00000602977 491 ntBASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMC4Q9NTJ3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 PTCHD3P3-201ENST00000403073 906 ntBASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 TPM4P1-201ENST00000436100 807 ntBASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 AC008735.5-201ENST00000623544 497 ntBASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 PRORSD1P-202ENST00000563365 2154 ntBASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 AC105020.1-201ENST00000435356 2205 ntBASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMC4Q9NTJ3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SMC4Q9NTJ3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SMC4Q9NTJ3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SMC4Q9NTJ3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.11
SMC4Q9NTJ3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 AC073621.1-201ENST00000392730 636 ntBASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 AC009078.2-202ENST00000463353 338 ntBASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 FAM215A-202ENST00000632077 792 ntBASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.95■■□□□ 1.1
SMC4Q9NTJ3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 AC106886.4-201ENST00000623557 2502 ntBASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 DUX4L17-201ENST00000557360 1267 ntBASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 AL049840.3-201ENST00000602669 611 ntBASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.94■■□□□ 1.1
SMC4Q9NTJ3 MIR7706-201ENST00000613747 67 ntBASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms