Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 ZFPL1-213ENST00000532200 802 ntTSL 212.69□□□□□ -0.382e-9■□□□□ 9
DROSHAQ9NRR4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC28.38■■■□□ 2.133e-6■□□□□ 9
DROSHAQ9NRR4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC38.63■■■■□ 3.771e-7■□□□□ 9
DROSHAQ9NRR4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC30.65■■■□□ 2.51e-7■□□□□ 9
DROSHAQ9NRR4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.21e-7■□□□□ 9
DROSHAQ9NRR4 DCP2-207ENST00000513585 1572 ntTSL 225.51■■□□□ 1.681e-7■□□□□ 9
DROSHAQ9NRR4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC24.62■■□□□ 1.531e-7■□□□□ 9
DROSHAQ9NRR4 DNAJB6-208ENST00000441561 1022 ntTSL 524.57■■□□□ 1.521e-7■□□□□ 9
DROSHAQ9NRR4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC23.69■■□□□ 1.381e-7■□□□□ 9
DROSHAQ9NRR4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.361e-7■□□□□ 9
DROSHAQ9NRR4 DCP2-205ENST00000510046 369 ntTSL 221.9■■□□□ 1.11e-7■□□□□ 9
DROSHAQ9NRR4 DNAJB6-214ENST00000486083 699 ntTSL 521.23■□□□□ 0.991e-7■□□□□ 9
DROSHAQ9NRR4 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.931e-7■□□□□ 9
DROSHAQ9NRR4 RPS20-203ENST00000519369 824 ntTSL 220.51■□□□□ 0.871e-7■□□□□ 9
DROSHAQ9NRR4 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.791e-7■□□□□ 9
DROSHAQ9NRR4 DCP2-203ENST00000504961 852 ntTSL 1 (best)19.68■□□□□ 0.741e-7■□□□□ 9
DROSHAQ9NRR4 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.681e-7■□□□□ 9
DROSHAQ9NRR4 DNAJB6-205ENST00000437030 566 ntTSL 518.07■□□□□ 0.481e-7■□□□□ 9
DROSHAQ9NRR4 TPI1-208ENST00000495834 820 ntTSL 217.66■□□□□ 0.421e-7■□□□□ 9
DROSHAQ9NRR4 RPS20-209ENST00000521289 737 ntTSL 517.54■□□□□ 0.41e-7■□□□□ 9
DROSHAQ9NRR4 DNAJB6-207ENST00000441291 614 ntTSL 317.43■□□□□ 0.381e-7■□□□□ 9
DROSHAQ9NRR4 DNAJB6-203ENST00000417758 852 ntTSL 516.98■□□□□ 0.311e-7■□□□□ 9
DROSHAQ9NRR4 TPI1-209ENST00000535434 1587 ntTSL 2 BASIC16.73■□□□□ 0.271e-7■□□□□ 9
DROSHAQ9NRR4 TPI1-203ENST00000462761 374 ntTSL 316.61■□□□□ 0.251e-7■□□□□ 9
DROSHAQ9NRR4 TPI1-207ENST00000493987 839 ntTSL 316.61■□□□□ 0.251e-7■□□□□ 9
DROSHAQ9NRR4 DNAJB6-211ENST00000459889 7992 ntTSL 1 (best)15.04■□□□□ -01e-7■□□□□ 9
DROSHAQ9NRR4 RPS20-212ENST00000618656 627 ntTSL 3 BASIC14.59□□□□□ -0.071e-7■□□□□ 9
DROSHAQ9NRR4 RPS20-207ENST00000520627 423 ntTSL 5 BASIC14.36□□□□□ -0.111e-7■□□□□ 9
DROSHAQ9NRR4 DNAJB6-217ENST00000488001 551 ntTSL 413.65□□□□□ -0.221e-7■□□□□ 9
DROSHAQ9NRR4 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.31e-7■□□□□ 9
DROSHAQ9NRR4 RPS20-204ENST00000519606 424 ntTSL 3 BASIC13.2□□□□□ -0.31e-7■□□□□ 9
DROSHAQ9NRR4 RPS20-206ENST00000520490 402 ntTSL 312.3□□□□□ -0.441e-7■□□□□ 9
DROSHAQ9NRR4 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC11.63□□□□□ -0.551e-7■□□□□ 9
DROSHAQ9NRR4 RPS20-202ENST00000518875 671 ntTSL 2 BASIC11.09□□□□□ -0.631e-7■□□□□ 9
DROSHAQ9NRR4 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC10.62□□□□□ -0.711e-7■□□□□ 9
DROSHAQ9NRR4 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.051e-7■□□□□ 9
DROSHAQ9NRR4 SNORD54-201ENST00000459159 67 ntBASIC-1.17□□□□□ -2.61e-7■□□□□ 9
DROSHAQ9NRR4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.167e-19■□□□□ 9
DROSHAQ9NRR4 FGFR4-216ENST00000514472 552 ntTSL 435.02■■■■□ 3.23e-6■□□□□ 9
DROSHAQ9NRR4 ARL6IP6-205ENST00000495469 1308 ntTSL 232.24■■■□□ 2.753e-6■□□□□ 9
DROSHAQ9NRR4 FGFR4-209ENST00000507708 476 ntTSL 332.03■■■□□ 2.723e-6■□□□□ 9
DROSHAQ9NRR4 FGFR4-212ENST00000510911 709 ntTSL 432.03■■■□□ 2.723e-6■□□□□ 9
DROSHAQ9NRR4 FGFR4-208ENST00000503708 770 ntTSL 429.27■■■□□ 2.283e-6■□□□□ 9
DROSHAQ9NRR4 WDR27-210ENST00000496752 1562 ntTSL 528.04■■■□□ 2.083e-6■□□□□ 9
DROSHAQ9NRR4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.663e-6■□□□□ 9
DROSHAQ9NRR4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.663e-6■□□□□ 9
DROSHAQ9NRR4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.593e-6■□□□□ 9
DROSHAQ9NRR4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.23e-6■□□□□ 9
DROSHAQ9NRR4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.873e-6■□□□□ 9
DROSHAQ9NRR4 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.553e-6■□□□□ 9
DROSHAQ9NRR4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.473e-6■□□□□ 9
DROSHAQ9NRR4 SRCAP-205ENST00000483083 5937 ntTSL 213.23□□□□□ -0.293e-6■□□□□ 9
DROSHAQ9NRR4 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC11.7□□□□□ -0.543e-6■□□□□ 9
DROSHAQ9NRR4 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.913e-6■□□□□ 9
DROSHAQ9NRR4 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.013e-6■□□□□ 9
DROSHAQ9NRR4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.958e-16■□□□□ 8.9
DROSHAQ9NRR4 RPL8-203ENST00000525232 1007 ntTSL 1 (best)32.97■■■□□ 2.878e-16■□□□□ 8.9
DROSHAQ9NRR4 MFGE8-208ENST00000558773 534 ntTSL 331.32■■■□□ 2.68e-16■□□□□ 8.9
DROSHAQ9NRR4 MFGE8-204ENST00000557944 435 ntTSL 230.15■■■□□ 2.428e-16■□□□□ 8.9
DROSHAQ9NRR4 MFGE8-207ENST00000558352 1031 ntTSL 227.63■■■□□ 2.018e-16■□□□□ 8.9
DROSHAQ9NRR4 MFGE8-212ENST00000559997 531 ntTSL 527.63■■■□□ 2.018e-16■□□□□ 8.9
DROSHAQ9NRR4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.018e-16■□□□□ 8.9
DROSHAQ9NRR4 MFGE8-206ENST00000558029 849 ntTSL 326.78■■□□□ 1.888e-16■□□□□ 8.9
DROSHAQ9NRR4 RPL8-210ENST00000531767 570 ntTSL 523.96■■□□□ 1.438e-16■□□□□ 8.9
DROSHAQ9NRR4 RPL8-212ENST00000532702 745 ntTSL 223.75■■□□□ 1.398e-16■□□□□ 8.9
DROSHAQ9NRR4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC23.16■■□□□ 1.38e-16■□□□□ 8.9
DROSHAQ9NRR4 RPL8-208ENST00000529163 556 ntTSL 217.92■□□□□ 0.468e-16■□□□□ 8.9
DROSHAQ9NRR4 INSIG1-204ENST00000425172 596 ntTSL 236.57■■■■□ 3.451e-9■□□□□ 8.9
DROSHAQ9NRR4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC29.08■■■□□ 2.251e-9■□□□□ 8.9
DROSHAQ9NRR4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC25.51■■□□□ 1.671e-9■□□□□ 8.9
DROSHAQ9NRR4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.181e-9■□□□□ 8.9
DROSHAQ9NRR4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC23.06■■□□□ 1.281e-6■□□□□ 8.9
DROSHAQ9NRR4 FBXO18-208ENST00000470089 979 ntTSL 544.83■■■■■ 4.772e-10■□□□□ 8.9
DROSHAQ9NRR4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC27.93■■■□□ 2.062e-10■□□□□ 8.9
DROSHAQ9NRR4 TBPL1-202ENST00000367869 623 ntTSL 327.62■■■□□ 2.012e-10■□□□□ 8.9
DROSHAQ9NRR4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.842e-10■□□□□ 8.9
DROSHAQ9NRR4 TBPL1-205ENST00000457715 865 ntTSL 526.37■■□□□ 1.812e-10■□□□□ 8.9
DROSHAQ9NRR4 STAT6-208ENST00000553499 603 ntTSL 425.84■■□□□ 1.732e-10■□□□□ 8.9
DROSHAQ9NRR4 STAT6-206ENST00000553275 670 ntTSL 324.01■■□□□ 1.432e-10■□□□□ 8.9
DROSHAQ9NRR4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC23.72■■□□□ 1.392e-10■□□□□ 8.9
DROSHAQ9NRR4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.332e-10■□□□□ 8.9
DROSHAQ9NRR4 TBPL1-204ENST00000416965 991 ntTSL 322.84■■□□□ 1.252e-10■□□□□ 8.9
DROSHAQ9NRR4 STAT6-207ENST00000553397 553 ntTSL 422.43■■□□□ 1.182e-10■□□□□ 8.9
DROSHAQ9NRR4 STAT6-213ENST00000554825 644 ntTSL 422.43■■□□□ 1.182e-10■□□□□ 8.9
DROSHAQ9NRR4 CLK2-206ENST00000484699 585 ntTSL 221.74■■□□□ 1.072e-10■□□□□ 8.9
DROSHAQ9NRR4 TRIM28-211ENST00000597968 504 ntTSL 221.26■□□□□ 0.992e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.822e-10■□□□□ 8.9
DROSHAQ9NRR4 FBXO18-206ENST00000462507 906 ntTSL 219.89■□□□□ 0.772e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC19.76■□□□□ 0.752e-10■□□□□ 8.9
DROSHAQ9NRR4 STAT6-204ENST00000538913 2879 ntTSL 2 BASIC18.43■□□□□ 0.542e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC18.24■□□□□ 0.512e-10■□□□□ 8.9
DROSHAQ9NRR4 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.52e-10■□□□□ 8.9
DROSHAQ9NRR4 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC17.9■□□□□ 0.462e-10■□□□□ 8.9
DROSHAQ9NRR4 STAT6-220ENST00000556155 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.422e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-231ENST00000557336 580 ntTSL 317.66■□□□□ 0.422e-10■□□□□ 8.9
DROSHAQ9NRR4 CLK2-207ENST00000497188 2702 ntTSL 217.49■□□□□ 0.392e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC17■□□□□ 0.312e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-214ENST00000554969 1924 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.252e-10■□□□□ 8.9
DROSHAQ9NRR4 STAT6-212ENST00000554764 2777 ntTSL 216.54■□□□□ 0.242e-10■□□□□ 8.9
DROSHAQ9NRR4 HNRNPC-213ENST00000554891 644 ntTSL 516.49■□□□□ 0.232e-10■□□□□ 8.9
Retrieved 100 of 16,331 protein–RNA pairs in 207.5 ms