Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.09■□□□□ 0.49
TLR9Q9NR96 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TLR9Q9NR96 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.09■□□□□ 0.49
TLR9Q9NR96 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TLR9Q9NR96 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
TLR9Q9NR96 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.08■□□□□ 0.49
TLR9Q9NR96 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR9Q9NR96 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.08■□□□□ 0.49
TLR9Q9NR96 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR9Q9NR96 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR9Q9NR96 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR9Q9NR96 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR9Q9NR96 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR9Q9NR96 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR9Q9NR96 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR9Q9NR96 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TLR9Q9NR96 FO538757.1-201ENST00000623083 1397 ntBASIC18.08■□□□□ 0.49
TLR9Q9NR96 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.08■□□□□ 0.49
TLR9Q9NR96 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TLR9Q9NR96 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR9Q9NR96 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TLR9Q9NR96 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TLR9Q9NR96 SPDYE7P-202ENST00000420373 878 ntBASIC18.08■□□□□ 0.48
TLR9Q9NR96 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR9Q9NR96 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR9Q9NR96 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR9Q9NR96 IGHV3-42-201ENST00000520410 361 ntBASIC18.08■□□□□ 0.48
TLR9Q9NR96 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 AC026150.2-201ENST00000564693 1156 ntBASIC18.08■□□□□ 0.48
TLR9Q9NR96 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR9Q9NR96 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR9Q9NR96 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR9Q9NR96 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR9Q9NR96 AC012569.1-201ENST00000591191 1524 ntBASIC18.08■□□□□ 0.48
TLR9Q9NR96 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.08■□□□□ 0.48
TLR9Q9NR96 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR9Q9NR96 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR9Q9NR96 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TLR9Q9NR96 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR9Q9NR96 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR9Q9NR96 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR9Q9NR96 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR9Q9NR96 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 TREML5P-201ENST00000421694 576 ntBASIC18.07■□□□□ 0.48
TLR9Q9NR96 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 LINC01225-203ENST00000563550 1244 ntBASIC18.07■□□□□ 0.48
TLR9Q9NR96 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR9Q9NR96 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 AC012645.4-201ENST00000610691 1061 ntBASIC18.07■□□□□ 0.48
TLR9Q9NR96 AL390754.1-201ENST00000619088 582 ntBASIC18.07■□□□□ 0.48
TLR9Q9NR96 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR9Q9NR96 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR9Q9NR96 AC008677.1-201ENST00000519230 1561 ntBASIC18.07■□□□□ 0.48
TLR9Q9NR96 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.07■□□□□ 0.48
TLR9Q9NR96 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR9Q9NR96 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR9Q9NR96 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR9Q9NR96 LTB4R2-202ENST00000528054 3092 ntBASIC18.07■□□□□ 0.48
TLR9Q9NR96 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TLR9Q9NR96 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms