Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 AP001059.3-201ENST00000619053 235 ntBASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 CROCCP2-202ENST00000412962 2773 ntBASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 FAM207CP-201ENST00000443486 507 ntBASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 AC079140.1-201ENST00000508039 487 ntBASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 AC008761.3-201ENST00000624803 892 ntBASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PDLIM7Q9NR12 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 AC093525.9-201ENST00000624961 1746 ntBASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 AC107890.1-201ENST00000422478 521 ntBASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 GPS2P2-201ENST00000430745 888 ntBASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 LINC02560-201ENST00000596379 459 ntBASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.03■□□□□ 0.64
PDLIM7Q9NR12 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 AC125807.1-201ENST00000483097 614 ntBASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 FO538757.1-201ENST00000623083 1397 ntBASIC19.02■□□□□ 0.64
PDLIM7Q9NR12 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.02■□□□□ 0.63
PDLIM7Q9NR12 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM7Q9NR12 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms