Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 RCN1P2-201ENST00000398357 915 ntBASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 AC005104.2-201ENST00000427818 678 ntBASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 AC002558.1-201ENST00000488906 803 ntBASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 KRT18P31-201ENST00000506277 1292 ntBASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 FOSL1P1-201ENST00000511041 816 ntBASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 AC100803.2-201ENST00000562459 1963 ntBASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLK4Q9HAZ1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 AC010460.3-201ENST00000511359 1579 ntBASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 AC009949.1-201ENST00000623048 1830 ntBASIC16.73■□□□□ 0.27
CLK4Q9HAZ1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 AC133963.1-201ENST00000504166 1679 ntBASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 MYCLP1-201ENST00000372451 1075 ntBASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.72■□□□□ 0.27
CLK4Q9HAZ1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms