Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 AC005412.3-201ENST00000580309 715 ntBASIC18.41■□□□□ 0.54
NXF3Q9H4D5 MIR4515-201ENST00000584082 81 ntBASIC18.41■□□□□ 0.54
NXF3Q9H4D5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 HCG11-201ENST00000411553 5696 ntBASIC18.41■□□□□ 0.54
NXF3Q9H4D5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NXF3Q9H4D5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 ADH5P3-201ENST00000433842 1137 ntBASIC18.4■□□□□ 0.54
NXF3Q9H4D5 AC140658.5-201ENST00000438532 169 ntBASIC18.4■□□□□ 0.54
NXF3Q9H4D5 AC112191.1-201ENST00000523689 701 ntBASIC18.4■□□□□ 0.54
NXF3Q9H4D5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.4■□□□□ 0.54
NXF3Q9H4D5 AC027612.4-201ENST00000605371 583 ntBASIC18.4■□□□□ 0.54
NXF3Q9H4D5 AC099522.2-201ENST00000607001 744 ntBASIC18.4■□□□□ 0.54
NXF3Q9H4D5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NXF3Q9H4D5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NXF3Q9H4D5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NXF3Q9H4D5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NXF3Q9H4D5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
NXF3Q9H4D5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.54
NXF3Q9H4D5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
NXF3Q9H4D5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NXF3Q9H4D5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NXF3Q9H4D5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 SLC22A20-204ENST00000530038 1673 ntBASIC18.39■□□□□ 0.53
NXF3Q9H4D5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 HMGA1P7-201ENST00000406908 502 ntBASIC18.39■□□□□ 0.53
NXF3Q9H4D5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 KRT18P28-201ENST00000453838 1332 ntBASIC18.39■□□□□ 0.53
NXF3Q9H4D5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NXF3Q9H4D5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms