Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 AL390719.2-201ENST00000606993 987 ntBASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 AC005363.2-201ENST00000618631 242 ntBASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 RNF216P1-203ENST00000404404 2427 ntBASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.17■□□□□ 0.02
COMMD4Q9H0A8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 TERF1P1-201ENST00000311003 1181 ntBASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 AC103564.2-201ENST00000432853 1299 ntBASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 AC007967.3-201ENST00000434308 558 ntBASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 BX664615.1-201ENST00000443558 458 ntBASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 AC011558.1-201ENST00000623459 338 ntBASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
COMMD4Q9H0A8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 AL137013.1-201ENST00000432946 1228 ntBASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 YBX1P2-201ENST00000489612 999 ntBASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD4Q9H0A8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms