Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 AC004911.1-201ENST00000416316 871 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 ZNRF2P3-201ENST00000424200 374 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 PPP1R14BP2-201ENST00000426284 444 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 KRT18P23-201ENST00000435622 1283 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 PPP1R14BP5-201ENST00000440334 435 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 AP002982.1-201ENST00000492365 877 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 RARRES2P10-201ENST00000564312 460 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 MIR3180-4-201ENST00000582223 153 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 Z99916.3-201ENST00000623422 1080 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 AL662844.4-201ENST00000606367 2838 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 LYSMD4-203ENST00000378904 2122 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms