Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE1Q99829 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CPNE1Q99829 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE1Q99829 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CPNE1Q99829 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CPNE1Q99829 DOC2GP-204ENST00000639052 2548 ntBASIC17.13■□□□□ 0.33
CPNE1Q99829 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE1Q99829 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CPNE1Q99829 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CPNE1Q99829 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE1Q99829 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CPNE1Q99829 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE1Q99829 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE1Q99829 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 KRT17P6-201ENST00000453795 1220 ntBASIC17.13■□□□□ 0.33
CPNE1Q99829 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 AC096582.2-201ENST00000510860 516 ntBASIC17.13■□□□□ 0.33
CPNE1Q99829 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE1Q99829 TPSP2-201ENST00000561760 610 ntBASIC17.13■□□□□ 0.33
CPNE1Q99829 BNIP3P18-201ENST00000593976 575 ntBASIC17.13■□□□□ 0.33
CPNE1Q99829 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE1Q99829 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CPNE1Q99829 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE1Q99829 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CPNE1Q99829 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CPNE1Q99829 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CPNE1Q99829 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE1Q99829 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CPNE1Q99829 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CPNE1Q99829 NSUN5P1-202ENST00000421140 1535 ntBASIC17.12■□□□□ 0.33
CPNE1Q99829 NSUN5P2-203ENST00000457352 1529 ntBASIC17.12■□□□□ 0.33
CPNE1Q99829 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE1Q99829 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.12■□□□□ 0.33
CPNE1Q99829 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CPNE1Q99829 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE1Q99829 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE1Q99829 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CPNE1Q99829 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CPNE1Q99829 RCN1P2-201ENST00000398357 915 ntBASIC17.12■□□□□ 0.33
CPNE1Q99829 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.12■□□□□ 0.33
CPNE1Q99829 AL020989.1-201ENST00000422979 469 ntBASIC17.12■□□□□ 0.33
CPNE1Q99829 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.12■□□□□ 0.33
CPNE1Q99829 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE1Q99829 NUS1P1-201ENST00000446295 882 ntBASIC17.12■□□□□ 0.33
CPNE1Q99829 TOB2P1-201ENST00000469761 992 ntBASIC17.12■□□□□ 0.33
CPNE1Q99829 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE1Q99829 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE1Q99829 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
CPNE1Q99829 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE1Q99829 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.12■□□□□ 0.33
CPNE1Q99829 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.12■□□□□ 0.33
CPNE1Q99829 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CPNE1Q99829 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE1Q99829 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.11■□□□□ 0.33
CPNE1Q99829 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE1Q99829 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE1Q99829 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
CPNE1Q99829 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE1Q99829 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE1Q99829 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CPNE1Q99829 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE1Q99829 AC148477.5-201ENST00000625164 1645 ntBASIC17.11■□□□□ 0.33
CPNE1Q99829 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms