Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 PVRIG2P-201ENST00000435460 978 ntBASIC11.41□□□□□ -0.58
LITAFQ99732 HLA-J-202ENST00000469281 1241 ntBASIC11.41□□□□□ -0.58
LITAFQ99732 AC026366.1-201ENST00000488803 879 ntBASIC11.41□□□□□ -0.58
LITAFQ99732 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC11.41□□□□□ -0.58
LITAFQ99732 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC11.41□□□□□ -0.58
LITAFQ99732 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC11.41□□□□□ -0.58
LITAFQ99732 CYGB-204ENST00000589342 815 ntTSL 3 BASIC11.41□□□□□ -0.58
LITAFQ99732 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC11.41□□□□□ -0.58
LITAFQ99732 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.41□□□□□ -0.58
LITAFQ99732 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.41□□□□□ -0.58
LITAFQ99732 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.41□□□□□ -0.58
LITAFQ99732 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LITAFQ99732 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LITAFQ99732 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.41□□□□□ -0.58
LITAFQ99732 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LITAFQ99732 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LITAFQ99732 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
LITAFQ99732 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
LITAFQ99732 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 TUBB8P12-201ENST00000308911 1335 ntBASIC11.4□□□□□ -0.58
LITAFQ99732 TUBB7P-202ENST00000428444 1305 ntBASIC11.4□□□□□ -0.58
LITAFQ99732 TUBB8P7-204ENST00000567960 1332 ntBASIC11.4□□□□□ -0.58
LITAFQ99732 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.4□□□□□ -0.58
LITAFQ99732 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 AL009178.2-201ENST00000597278 2719 ntBASIC11.4□□□□□ -0.58
LITAFQ99732 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC11.4□□□□□ -0.58
LITAFQ99732 GOLGA8DP-202ENST00000341390 2184 ntBASIC11.4□□□□□ -0.58
LITAFQ99732 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
LITAFQ99732 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC11.4□□□□□ -0.58
LITAFQ99732 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.4□□□□□ -0.58
LITAFQ99732 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
LITAFQ99732 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 HES2-202ENST00000377836 507 ntTSL 2 BASIC11.4□□□□□ -0.58
LITAFQ99732 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC11.4□□□□□ -0.58
LITAFQ99732 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC11.4□□□□□ -0.58
LITAFQ99732 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC11.4□□□□□ -0.58
LITAFQ99732 RPS15-203ENST00000586096 570 ntTSL 2 BASIC11.4□□□□□ -0.58
LITAFQ99732 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC11.4□□□□□ -0.58
LITAFQ99732 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
LITAFQ99732 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC11.4□□□□□ -0.58
LITAFQ99732 ANKRD20A6P-201ENST00000618763 204 ntBASIC11.4□□□□□ -0.58
LITAFQ99732 AC009154.2-201ENST00000621177 724 ntBASIC11.4□□□□□ -0.58
LITAFQ99732 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC11.4□□□□□ -0.58
LITAFQ99732 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.4□□□□□ -0.58
LITAFQ99732 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC11.4□□□□□ -0.58
LITAFQ99732 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LITAFQ99732 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.4□□□□□ -0.58
LITAFQ99732 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
LITAFQ99732 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
LITAFQ99732 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.4□□□□□ -0.58
LITAFQ99732 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.4□□□□□ -0.59
LITAFQ99732 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC11.4□□□□□ -0.59
LITAFQ99732 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.59
LITAFQ99732 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
LITAFQ99732 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
LITAFQ99732 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LITAFQ99732 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LITAFQ99732 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LITAFQ99732 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC11.39□□□□□ -0.59
LITAFQ99732 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.39□□□□□ -0.59
LITAFQ99732 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.39□□□□□ -0.59
LITAFQ99732 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.39□□□□□ -0.59
LITAFQ99732 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.39□□□□□ -0.59
LITAFQ99732 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.39□□□□□ -0.59
LITAFQ99732 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
LITAFQ99732 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
LITAFQ99732 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms