Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.77□□□□□ -0.04
COL12A1Q99715 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
COL12A1Q99715 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL12A1Q99715 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COL12A1Q99715 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL12A1Q99715 AC098850.1-201ENST00000419919 790 ntBASIC14.77□□□□□ -0.04
COL12A1Q99715 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COL12A1Q99715 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.77□□□□□ -0.04
COL12A1Q99715 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.77□□□□□ -0.04
COL12A1Q99715 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.77□□□□□ -0.04
COL12A1Q99715 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.77□□□□□ -0.04
COL12A1Q99715 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL12A1Q99715 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL12A1Q99715 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL12A1Q99715 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL12A1Q99715 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL12A1Q99715 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.77□□□□□ -0.04
COL12A1Q99715 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COL12A1Q99715 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL12A1Q99715 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
COL12A1Q99715 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
COL12A1Q99715 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL12A1Q99715 RPL37AP1-201ENST00000412502 279 ntBASIC14.77□□□□□ -0.05
COL12A1Q99715 RPS2P36-201ENST00000456516 831 ntBASIC14.77□□□□□ -0.05
COL12A1Q99715 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.77□□□□□ -0.05
COL12A1Q99715 RNA5SP412-201ENST00000516234 123 ntBASIC14.77□□□□□ -0.05
COL12A1Q99715 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.77□□□□□ -0.05
COL12A1Q99715 AC027307.2-201ENST00000591252 911 ntBASIC14.77□□□□□ -0.05
COL12A1Q99715 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL12A1Q99715 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.77□□□□□ -0.05
COL12A1Q99715 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL12A1Q99715 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL12A1Q99715 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.77□□□□□ -0.05
COL12A1Q99715 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL12A1Q99715 AC073592.3-201ENST00000625118 1834 ntBASIC14.77□□□□□ -0.05
COL12A1Q99715 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.77□□□□□ -0.05
COL12A1Q99715 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.77□□□□□ -0.05
COL12A1Q99715 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL12A1Q99715 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL12A1Q99715 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
COL12A1Q99715 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL12A1Q99715 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL12A1Q99715 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL12A1Q99715 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.77□□□□□ -0.05
COL12A1Q99715 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.77□□□□□ -0.05
COL12A1Q99715 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
COL12A1Q99715 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.77□□□□□ -0.05
COL12A1Q99715 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL12A1Q99715 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.77□□□□□ -0.05
COL12A1Q99715 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
COL12A1Q99715 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.76□□□□□ -0.05
COL12A1Q99715 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.76□□□□□ -0.05
COL12A1Q99715 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.76□□□□□ -0.05
COL12A1Q99715 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
COL12A1Q99715 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.76□□□□□ -0.05
COL12A1Q99715 AC092978.1-202ENST00000637590 1327 ntBASIC14.76□□□□□ -0.05
COL12A1Q99715 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
COL12A1Q99715 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
COL12A1Q99715 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.76□□□□□ -0.05
COL12A1Q99715 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.76□□□□□ -0.05
COL12A1Q99715 IGHJ2P-201ENST00000454480 60 ntBASIC14.76□□□□□ -0.05
COL12A1Q99715 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
COL12A1Q99715 ZNF890P-202ENST00000530367 1156 ntBASIC14.76□□□□□ -0.05
COL12A1Q99715 HNRNPUP1-201ENST00000554987 333 ntBASIC14.76□□□□□ -0.05
COL12A1Q99715 RPSAP52-203ENST00000622976 1023 ntBASIC14.76□□□□□ -0.05
COL12A1Q99715 BX276092.7-203ENST00000637198 1536 ntBASIC14.76□□□□□ -0.05
COL12A1Q99715 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
COL12A1Q99715 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.76□□□□□ -0.05
COL12A1Q99715 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.76□□□□□ -0.05
COL12A1Q99715 AC093525.8-201ENST00000624099 1342 ntBASIC14.76□□□□□ -0.05
COL12A1Q99715 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
COL12A1Q99715 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.76□□□□□ -0.05
COL12A1Q99715 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.76□□□□□ -0.05
COL12A1Q99715 AC012569.1-201ENST00000591191 1524 ntBASIC14.76□□□□□ -0.05
COL12A1Q99715 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
COL12A1Q99715 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.76□□□□□ -0.05
COL12A1Q99715 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL12A1Q99715 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.76□□□□□ -0.05
COL12A1Q99715 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.76□□□□□ -0.05
COL12A1Q99715 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.76□□□□□ -0.05
COL12A1Q99715 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.76□□□□□ -0.05
COL12A1Q99715 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.76□□□□□ -0.05
COL12A1Q99715 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms