Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 MCCD1P1-208ENST00000445732 328 ntBASIC16.16■□□□□ 0.18
NR1H4Q96RI1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.16■□□□□ 0.18
NR1H4Q96RI1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 ALOX12P2-203ENST00000570921 1945 ntBASIC16.15■□□□□ 0.18
NR1H4Q96RI1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.15■□□□□ 0.18
NR1H4Q96RI1 AC036111.1-201ENST00000533973 1582 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms