Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK1Q96PY6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEK1Q96PY6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 AC243591.1-201ENST00000452967 1364 ntBASIC20.26■□□□□ 0.83
NEK1Q96PY6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK1Q96PY6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK1Q96PY6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK1Q96PY6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK1Q96PY6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK1Q96PY6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEK1Q96PY6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK1Q96PY6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 RNF216P1-203ENST00000404404 2427 ntBASIC20.26■□□□□ 0.83
NEK1Q96PY6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK1Q96PY6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK1Q96PY6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 PCDHB17P-201ENST00000539533 2393 ntBASIC20.25■□□□□ 0.83
NEK1Q96PY6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.25■□□□□ 0.83
NEK1Q96PY6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK1Q96PY6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK1Q96PY6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK1Q96PY6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEK1Q96PY6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NEK1Q96PY6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEK1Q96PY6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NEK1Q96PY6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK1Q96PY6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.24■□□□□ 0.83
NEK1Q96PY6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK1Q96PY6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.24■□□□□ 0.83
NEK1Q96PY6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.24■□□□□ 0.83
NEK1Q96PY6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.24■□□□□ 0.83
NEK1Q96PY6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.24■□□□□ 0.83
NEK1Q96PY6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.24■□□□□ 0.83
NEK1Q96PY6 TERC-201ENST00000602385 541 ntBASIC20.24■□□□□ 0.83
NEK1Q96PY6 TP73-AS1-207ENST00000624167 988 ntBASIC20.24■□□□□ 0.83
NEK1Q96PY6 AC107918.4-202ENST00000641623 219 ntBASIC20.24■□□□□ 0.83
NEK1Q96PY6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEK1Q96PY6 AC099398.1-201ENST00000567919 2776 ntBASIC20.24■□□□□ 0.83
NEK1Q96PY6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK1Q96PY6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
NEK1Q96PY6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK1Q96PY6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
NEK1Q96PY6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK1Q96PY6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK1Q96PY6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEK1Q96PY6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.24■□□□□ 0.83
NEK1Q96PY6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.24■□□□□ 0.83
NEK1Q96PY6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEK1Q96PY6 FLJ38576-201ENST00000623820 2459 ntBASIC20.24■□□□□ 0.83
NEK1Q96PY6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEK1Q96PY6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEK1Q96PY6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEK1Q96PY6 AC078925.2-201ENST00000624013 1973 ntBASIC20.23■□□□□ 0.83
NEK1Q96PY6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEK1Q96PY6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEK1Q96PY6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEK1Q96PY6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NEK1Q96PY6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEK1Q96PY6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NEK1Q96PY6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.23■□□□□ 0.83
NEK1Q96PY6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms