Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 EGFEM1P-202ENST00000431685 1563 ntBASIC21.02■□□□□ 0.96
NLRP3Q96P20 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NLRP3Q96P20 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLRP3Q96P20 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 FO538757.1-201ENST00000623083 1397 ntBASIC21.02■□□□□ 0.96
NLRP3Q96P20 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLRP3Q96P20 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NLRP3Q96P20 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NLRP3Q96P20 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLRP3Q96P20 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.02■□□□□ 0.96
NLRP3Q96P20 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLRP3Q96P20 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 SLC25A39P2-201ENST00000537614 270 ntBASIC21.02■□□□□ 0.96
NLRP3Q96P20 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NLRP3Q96P20 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 AC008267.7-201ENST00000624570 1194 ntBASIC21.02■□□□□ 0.96
NLRP3Q96P20 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLRP3Q96P20 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLRP3Q96P20 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLRP3Q96P20 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NLRP3Q96P20 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.02■□□□□ 0.96
NLRP3Q96P20 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NLRP3Q96P20 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NLRP3Q96P20 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NLRP3Q96P20 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NLRP3Q96P20 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.02■□□□□ 0.95
NLRP3Q96P20 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NLRP3Q96P20 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.02■□□□□ 0.95
NLRP3Q96P20 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 TREML5P-201ENST00000421694 576 ntBASIC21.01■□□□□ 0.95
NLRP3Q96P20 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 AC087641.1-201ENST00000557561 1021 ntBASIC21.01■□□□□ 0.95
NLRP3Q96P20 MIR3909-201ENST00000579518 119 ntBASIC21.01■□□□□ 0.95
NLRP3Q96P20 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 AC135050.7-201ENST00000624508 2218 ntBASIC21.01■□□□□ 0.95
NLRP3Q96P20 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NLRP3Q96P20 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.01■□□□□ 0.95
NLRP3Q96P20 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21■□□□□ 0.95
NLRP3Q96P20 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21■□□□□ 0.95
NLRP3Q96P20 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NLRP3Q96P20 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
NLRP3Q96P20 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NLRP3Q96P20 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NLRP3Q96P20 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
NLRP3Q96P20 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21■□□□□ 0.95
NLRP3Q96P20 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NLRP3Q96P20 TSPY16P-201ENST00000449843 468 ntBASIC21■□□□□ 0.95
NLRP3Q96P20 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21■□□□□ 0.95
NLRP3Q96P20 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21■□□□□ 0.95
NLRP3Q96P20 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21■□□□□ 0.95
NLRP3Q96P20 AC027307.2-201ENST00000591252 911 ntBASIC21■□□□□ 0.95
NLRP3Q96P20 AP001350.2-201ENST00000625104 1094 ntBASIC21■□□□□ 0.95
NLRP3Q96P20 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21■□□□□ 0.95
NLRP3Q96P20 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
NLRP3Q96P20 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NLRP3Q96P20 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms