Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 AC016027.1-202ENST00000607927 1699 ntBASIC22.36■■□□□ 1.17
NBPF4Q96M43 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
NBPF4Q96M43 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
NBPF4Q96M43 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NBPF4Q96M43 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NBPF4Q96M43 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
NBPF4Q96M43 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC22.36■■□□□ 1.17
NBPF4Q96M43 TSPY16P-201ENST00000449843 468 ntBASIC22.36■■□□□ 1.17
NBPF4Q96M43 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC22.36■■□□□ 1.17
NBPF4Q96M43 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC22.36■■□□□ 1.17
NBPF4Q96M43 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
NBPF4Q96M43 MIR3909-201ENST00000579518 119 ntBASIC22.36■■□□□ 1.17
NBPF4Q96M43 MPDU1-223ENST00000582151 728 ntBASIC22.36■■□□□ 1.17
NBPF4Q96M43 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.36■■□□□ 1.17
NBPF4Q96M43 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC22.36■■□□□ 1.17
NBPF4Q96M43 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NBPF4Q96M43 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC22.36■■□□□ 1.17
NBPF4Q96M43 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
NBPF4Q96M43 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
NBPF4Q96M43 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NBPF4Q96M43 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NBPF4Q96M43 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NBPF4Q96M43 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.36■■□□□ 1.17
NBPF4Q96M43 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 FOS-208ENST00000555686 1496 ntTSL 2 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 AC015922.1-201ENST00000421102 1152 ntBASIC22.35■■□□□ 1.17
NBPF4Q96M43 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 AC097493.3-201ENST00000509725 367 ntBASIC22.35■■□□□ 1.17
NBPF4Q96M43 AC087641.1-201ENST00000557561 1021 ntBASIC22.35■■□□□ 1.17
NBPF4Q96M43 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 FRMD8P1-201ENST00000440433 1524 ntBASIC22.35■■□□□ 1.17
NBPF4Q96M43 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NBPF4Q96M43 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC22.35■■□□□ 1.17
NBPF4Q96M43 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NBPF4Q96M43 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NBPF4Q96M43 AC131009.4-201ENST00000624048 1740 ntBASIC22.34■■□□□ 1.17
NBPF4Q96M43 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NBPF4Q96M43 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC22.34■■□□□ 1.17
NBPF4Q96M43 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NBPF4Q96M43 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NBPF4Q96M43 RAC2-204ENST00000406508 893 ntTSL 5 BASIC22.34■■□□□ 1.17
NBPF4Q96M43 OARD1-208ENST00000469104 704 ntTSL 2 BASIC22.34■■□□□ 1.17
NBPF4Q96M43 AL390754.1-201ENST00000619088 582 ntBASIC22.34■■□□□ 1.17
NBPF4Q96M43 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC22.34■■□□□ 1.17
NBPF4Q96M43 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
NBPF4Q96M43 AF228730.6-201ENST00000641497 218 ntBASIC22.34■■□□□ 1.17
NBPF4Q96M43 AC084121.3-201ENST00000641716 218 ntBASIC22.34■■□□□ 1.17
NBPF4Q96M43 AC105233.6-201ENST00000642093 218 ntBASIC22.34■■□□□ 1.17
NBPF4Q96M43 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
NBPF4Q96M43 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NBPF4Q96M43 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
NBPF4Q96M43 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.34■■□□□ 1.17
NBPF4Q96M43 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NBPF4Q96M43 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NBPF4Q96M43 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NBPF4Q96M43 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.33■■□□□ 1.17
NBPF4Q96M43 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC22.33■■□□□ 1.17
NBPF4Q96M43 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
NBPF4Q96M43 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.33■■□□□ 1.17
NBPF4Q96M43 AC116353.5-201ENST00000638148 1699 ntBASIC22.33■■□□□ 1.17
NBPF4Q96M43 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NBPF4Q96M43 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC22.33■■□□□ 1.17
NBPF4Q96M43 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
NBPF4Q96M43 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NBPF4Q96M43 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
NBPF4Q96M43 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
NBPF4Q96M43 VMA21-202ENST00000370361 693 ntTSL 5 BASIC22.33■■□□□ 1.17
NBPF4Q96M43 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC22.33■■□□□ 1.17
NBPF4Q96M43 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC22.33■■□□□ 1.17
NBPF4Q96M43 SPDYE7P-202ENST00000420373 878 ntBASIC22.33■■□□□ 1.17
NBPF4Q96M43 AC092580.3-201ENST00000430932 139 ntBASIC22.33■■□□□ 1.17
NBPF4Q96M43 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.33■■□□□ 1.17
NBPF4Q96M43 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC22.33■■□□□ 1.17
NBPF4Q96M43 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms