Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LINC00895-201ENST00000629028 1637 ntBASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 CLEC4GP1-201ENST00000596555 870 ntBASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.71■□□□□ 0.26
PDLIM5Q96HC4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
PDLIM5Q96HC4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PDLIM5Q96HC4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PDLIM5Q96HC4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
PDLIM5Q96HC4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 AC021087.4-201ENST00000563761 564 ntBASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 AC025062.2-201ENST00000605477 670 ntBASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 AF228730.7-201ENST00000641842 219 ntBASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDLIM5Q96HC4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.69■□□□□ 0.26
PDLIM5Q96HC4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms