Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
DDX11Q96FC9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.36■□□□□ 0.85
DDX11Q96FC9 AC122714.2-201ENST00000502787 707 ntBASIC20.36■□□□□ 0.85
DDX11Q96FC9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
DDX11Q96FC9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.36■□□□□ 0.85
DDX11Q96FC9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.36■□□□□ 0.85
DDX11Q96FC9 AC008735.5-201ENST00000623544 497 ntBASIC20.36■□□□□ 0.85
DDX11Q96FC9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.36■□□□□ 0.85
DDX11Q96FC9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
DDX11Q96FC9 AC060834.1-201ENST00000443027 2032 ntBASIC20.36■□□□□ 0.85
DDX11Q96FC9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
DDX11Q96FC9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 AC116353.5-201ENST00000638148 1699 ntBASIC20.35■□□□□ 0.85
DDX11Q96FC9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 AC011676.5-201ENST00000624864 2660 ntBASIC20.35■□□□□ 0.85
DDX11Q96FC9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
DDX11Q96FC9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
DDX11Q96FC9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.35■□□□□ 0.85
DDX11Q96FC9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.35■□□□□ 0.85
DDX11Q96FC9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.35■□□□□ 0.85
DDX11Q96FC9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
DDX11Q96FC9 AC027601.4-201ENST00000611259 610 ntBASIC20.35■□□□□ 0.85
DDX11Q96FC9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.35■□□□□ 0.85
DDX11Q96FC9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
DDX11Q96FC9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.35■□□□□ 0.85
DDX11Q96FC9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
DDX11Q96FC9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.35■□□□□ 0.85
DDX11Q96FC9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
DDX11Q96FC9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX11Q96FC9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX11Q96FC9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
DDX11Q96FC9 NKILA-202ENST00000614771 2598 ntBASIC20.34■□□□□ 0.85
DDX11Q96FC9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX11Q96FC9 MIR1233-2-201ENST00000408138 82 ntBASIC20.34■□□□□ 0.85
DDX11Q96FC9 MIR1233-1-201ENST00000408722 82 ntBASIC20.34■□□□□ 0.85
DDX11Q96FC9 BX842568.4-201ENST00000421222 227 ntBASIC20.34■□□□□ 0.85
DDX11Q96FC9 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.34■□□□□ 0.85
DDX11Q96FC9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX11Q96FC9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX11Q96FC9 AC105339.3-201ENST00000560043 636 ntBASIC20.34■□□□□ 0.85
DDX11Q96FC9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.34■□□□□ 0.85
DDX11Q96FC9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX11Q96FC9 AC107918.4-202ENST00000641623 219 ntBASIC20.34■□□□□ 0.85
DDX11Q96FC9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX11Q96FC9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.34■□□□□ 0.85
DDX11Q96FC9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
DDX11Q96FC9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX11Q96FC9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX11Q96FC9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX11Q96FC9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.34■□□□□ 0.85
DDX11Q96FC9 AC084018.2-201ENST00000613093 2607 ntBASIC20.34■□□□□ 0.85
DDX11Q96FC9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX11Q96FC9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX11Q96FC9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.34■□□□□ 0.85
DDX11Q96FC9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX11Q96FC9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX11Q96FC9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDX11Q96FC9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX11Q96FC9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX11Q96FC9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDX11Q96FC9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDX11Q96FC9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.33■□□□□ 0.85
DDX11Q96FC9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.33■□□□□ 0.85
DDX11Q96FC9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
DDX11Q96FC9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDX11Q96FC9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX11Q96FC9 AC046185.3-201ENST00000623228 1824 ntBASIC20.33■□□□□ 0.85
DDX11Q96FC9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms