Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 FGFR3P6-201ENST00000457012 610 ntBASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 NCF1C-201ENST00000438382 1427 ntBASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 AL590787.1-201ENST00000568856 1315 ntBASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 AC078925.2-201ENST00000624013 1973 ntBASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 AC008608.2-201ENST00000606089 416 ntBASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.67■□□□□ 0.26
RHBDF1Q96CC6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 AKR1C7P-201ENST00000305623 895 ntBASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 AP002414.1-201ENST00000391405 1147 ntBASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 SART3-203ENST00000546611 1184 ntBASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 DUX4L17-201ENST00000557360 1267 ntBASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 CLEC4GP1-201ENST00000596555 870 ntBASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 AC012313.10-201ENST00000623509 926 ntBASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.66■□□□□ 0.26
RHBDF1Q96CC6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms