Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 IGHV3-65-201ENST00000523210 341 ntBASIC15.18■□□□□ 0.02
APH1AQ96BI3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 AC145285.3-201ENST00000564603 959 ntBASIC15.18■□□□□ 0.02
APH1AQ96BI3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 AF228730.7-201ENST00000641842 219 ntBASIC15.18■□□□□ 0.02
APH1AQ96BI3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 AC141586.5-201ENST00000624546 2050 ntBASIC15.18■□□□□ 0.02
APH1AQ96BI3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 AC009947.1-201ENST00000444350 727 ntBASIC15.17■□□□□ 0.02
APH1AQ96BI3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 SLC25A1P1-201ENST00000528351 927 ntBASIC15.17■□□□□ 0.02
APH1AQ96BI3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 TERC-201ENST00000602385 541 ntBASIC15.17■□□□□ 0.02
APH1AQ96BI3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
APH1AQ96BI3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
APH1AQ96BI3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 MRPL20P1-201ENST00000400819 433 ntBASIC15.16■□□□□ 0.02
APH1AQ96BI3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 AC108073.2-201ENST00000464002 357 ntBASIC15.16■□□□□ 0.02
APH1AQ96BI3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms