Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 PCDHB17P-201ENST00000539533 2393 ntBASIC15.42■□□□□ 0.06
PTP4A1Q93096 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTP4A1Q93096 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PTP4A1Q93096 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 AC132938.5-201ENST00000624980 1813 ntBASIC15.41■□□□□ 0.06
PTP4A1Q93096 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 CHCHD2P8-201ENST00000429873 447 ntBASIC15.41■□□□□ 0.06
PTP4A1Q93096 STK19B-204ENST00000512515 211 ntBASIC15.41■□□□□ 0.06
PTP4A1Q93096 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 AL358472.4-201ENST00000633140 710 ntBASIC15.41■□□□□ 0.06
PTP4A1Q93096 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 AL662844.4-201ENST00000606367 2838 ntBASIC15.41■□□□□ 0.06
PTP4A1Q93096 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PTP4A1Q93096 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A1Q93096 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PTP4A1Q93096 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A1Q93096 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.4■□□□□ 0.06
PTP4A1Q93096 GPR89P-201ENST00000407924 1495 ntBASIC15.4■□□□□ 0.06
PTP4A1Q93096 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.4■□□□□ 0.06
PTP4A1Q93096 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A1Q93096 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A1Q93096 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A1Q93096 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A1Q93096 AC016734.2-201ENST00000624325 1377 ntBASIC15.4■□□□□ 0.06
PTP4A1Q93096 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A1Q93096 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PTP4A1Q93096 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A1Q93096 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A1Q93096 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A1Q93096 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A1Q93096 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.4■□□□□ 0.06
PTP4A1Q93096 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A1Q93096 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.4■□□□□ 0.06
PTP4A1Q93096 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PTP4A1Q93096 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms