Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 SLC25A6P4-201ENST00000586535 553 ntBASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 AL589182.2-201ENST00000619332 1049 ntBASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 PCDHB17P-201ENST00000539533 2393 ntBASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 AC025062.2-201ENST00000605477 670 ntBASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDH19Q8TAB3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 MRPL3P1-201ENST00000400109 1033 ntBASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 AP000347.1-202ENST00000435868 847 ntBASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 AC021087.4-201ENST00000563761 564 ntBASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 AL139424.1-201ENST00000607572 797 ntBASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
PCDH19Q8TAB3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms