Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
RTL9Q8NET4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
RTL9Q8NET4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.95■□□□□ 0.94
RTL9Q8NET4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.95■□□□□ 0.94
RTL9Q8NET4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 BCL2-203ENST00000589955 5011 ntBASIC20.95■□□□□ 0.94
RTL9Q8NET4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RTL9Q8NET4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.95■□□□□ 0.94
RTL9Q8NET4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 AC069335.1-201ENST00000489972 472 ntBASIC20.95■□□□□ 0.94
RTL9Q8NET4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RTL9Q8NET4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.95■□□□□ 0.94
RTL9Q8NET4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.95■□□□□ 0.94
RTL9Q8NET4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.95■□□□□ 0.94
RTL9Q8NET4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.95■□□□□ 0.94
RTL9Q8NET4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTL9Q8NET4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTL9Q8NET4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.94■□□□□ 0.94
RTL9Q8NET4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RTL9Q8NET4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTL9Q8NET4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.94■□□□□ 0.94
RTL9Q8NET4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTL9Q8NET4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.94■□□□□ 0.94
RTL9Q8NET4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTL9Q8NET4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.94■□□□□ 0.94
RTL9Q8NET4 AL031055.1-201ENST00000606362 631 ntBASIC20.94■□□□□ 0.94
RTL9Q8NET4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTL9Q8NET4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTL9Q8NET4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTL9Q8NET4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTL9Q8NET4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RTL9Q8NET4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.94■□□□□ 0.94
RTL9Q8NET4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTL9Q8NET4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.93■□□□□ 0.94
RTL9Q8NET4 GPS2P2-201ENST00000430745 888 ntBASIC20.93■□□□□ 0.94
RTL9Q8NET4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 SPCS2P4-201ENST00000436160 681 ntBASIC20.93■□□□□ 0.94
RTL9Q8NET4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 AC087641.1-201ENST00000557561 1021 ntBASIC20.93■□□□□ 0.94
RTL9Q8NET4 LINC01225-203ENST00000563550 1244 ntBASIC20.93■□□□□ 0.94
RTL9Q8NET4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTL9Q8NET4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.93■□□□□ 0.94
RTL9Q8NET4 AC134043.2-201ENST00000624206 2238 ntBASIC20.92■□□□□ 0.94
RTL9Q8NET4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL9Q8NET4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RTL9Q8NET4 KRT8P49-201ENST00000604166 1432 ntBASIC20.92■□□□□ 0.94
RTL9Q8NET4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RTL9Q8NET4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTL9Q8NET4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RTL9Q8NET4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL9Q8NET4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTL9Q8NET4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL9Q8NET4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTL9Q8NET4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.92■□□□□ 0.94
RTL9Q8NET4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL9Q8NET4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL9Q8NET4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL9Q8NET4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL9Q8NET4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.92■□□□□ 0.94
RTL9Q8NET4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.92■□□□□ 0.94
RTL9Q8NET4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.92■□□□□ 0.94
RTL9Q8NET4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms