Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 AL513190.1-201ENST00000621254 727 ntBASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 TOP3BP1-201ENST00000420768 1380 ntBASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 AP001094.4-201ENST00000579008 2176 ntBASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 AC004832.2-201ENST00000426397 482 ntBASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 AC023511.2-201ENST00000618803 211 ntBASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF39Q8N4T4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 KRT19P2-202ENST00000557173 1012 ntBASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.09■□□□□ 0.17
ARHGEF39Q8N4T4 AC004877.2-201ENST00000623941 599 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms