Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
VPS8Q8N3P4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
VPS8Q8N3P4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC26.51■■□□□ 1.83
VPS8Q8N3P4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC26.51■■□□□ 1.83
VPS8Q8N3P4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC26.51■■□□□ 1.83
VPS8Q8N3P4 AP000344.2-201ENST00000512987 629 ntBASIC26.51■■□□□ 1.83
VPS8Q8N3P4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC26.51■■□□□ 1.83
VPS8Q8N3P4 AC022145.2-201ENST00000598203 171 ntBASIC26.51■■□□□ 1.83
VPS8Q8N3P4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC26.51■■□□□ 1.83
VPS8Q8N3P4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
VPS8Q8N3P4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
VPS8Q8N3P4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
VPS8Q8N3P4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC26.5■■□□□ 1.83
VPS8Q8N3P4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC26.5■■□□□ 1.83
VPS8Q8N3P4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC26.5■■□□□ 1.83
VPS8Q8N3P4 AC254562.1-201ENST00000417586 456 ntBASIC26.5■■□□□ 1.83
VPS8Q8N3P4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC26.5■■□□□ 1.83
VPS8Q8N3P4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
VPS8Q8N3P4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VPS8Q8N3P4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC26.5■■□□□ 1.83
VPS8Q8N3P4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VPS8Q8N3P4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VPS8Q8N3P4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 CDK2AP2P3-201ENST00000422476 372 ntBASIC26.49■■□□□ 1.83
VPS8Q8N3P4 CEND1P1-201ENST00000451006 455 ntBASIC26.49■■□□□ 1.83
VPS8Q8N3P4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS8Q8N3P4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 AL135744.1-201ENST00000565098 629 ntBASIC26.48■■□□□ 1.83
VPS8Q8N3P4 RARRES2P8-201ENST00000566335 367 ntBASIC26.48■■□□□ 1.83
VPS8Q8N3P4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 SLC9A3P2-201ENST00000447821 2021 ntBASIC26.48■■□□□ 1.83
VPS8Q8N3P4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC26.48■■□□□ 1.83
VPS8Q8N3P4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS8Q8N3P4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms