Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC091046.1-201ENST00000331871 207 ntBASIC23.33■■□□□ 1.32
LTBP4Q8N2S1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC23.33■■□□□ 1.32
LTBP4Q8N2S1 AL355334.1-201ENST00000417713 215 ntBASIC23.33■■□□□ 1.32
LTBP4Q8N2S1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
LTBP4Q8N2S1 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC23.33■■□□□ 1.32
LTBP4Q8N2S1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.32
LTBP4Q8N2S1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC23.33■■□□□ 1.32
LTBP4Q8N2S1 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC23.33■■□□□ 1.32
LTBP4Q8N2S1 AC021097.1-201ENST00000607902 574 ntBASIC23.33■■□□□ 1.32
LTBP4Q8N2S1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 RNA5SP410-201ENST00000516285 106 ntBASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 MIR4492-201ENST00000581627 80 ntBASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LTBP4Q8N2S1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 RPL17P11-201ENST00000417593 544 ntBASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 AC025048.3-201ENST00000590609 569 ntBASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 GOLGA2P9-201ENST00000596977 1937 ntBASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC23.31■■□□□ 1.32
LTBP4Q8N2S1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 AC091271.1-201ENST00000611877 1162 ntBASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 HLA-DQB1-201ENST00000374943 1656 ntBASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 OLR1-203ENST00000432556 950 ntTSL 2 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 AP001258.2-201ENST00000529891 490 ntBASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 KC6-205ENST00000599934 556 ntTSL 4 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 AL391069.4-201ENST00000609583 481 ntBASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC23.3■■□□□ 1.32
LTBP4Q8N2S1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 AC126763.1-201ENST00000552015 2118 ntBASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 IMPDH1P4-201ENST00000445028 1534 ntBASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 AL162726.2-201ENST00000438986 1017 ntBASIC23.29■■□□□ 1.32
LTBP4Q8N2S1 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms