Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.6■□□□□ 0.57
VPS52Q8N1B4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 MKNK2P1-201ENST00000437526 628 ntBASIC18.6■□□□□ 0.57
VPS52Q8N1B4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.6■□□□□ 0.57
VPS52Q8N1B4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.6■□□□□ 0.57
VPS52Q8N1B4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 AL353135.1-201ENST00000606729 504 ntBASIC18.59■□□□□ 0.57
VPS52Q8N1B4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 AC004877.2-201ENST00000623941 599 ntBASIC18.59■□□□□ 0.57
VPS52Q8N1B4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS52Q8N1B4 ELL2P1-201ENST00000413990 1906 ntBASIC18.59■□□□□ 0.57
VPS52Q8N1B4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.58■□□□□ 0.57
VPS52Q8N1B4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.58■□□□□ 0.57
VPS52Q8N1B4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS52Q8N1B4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS52Q8N1B4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VPS52Q8N1B4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.58■□□□□ 0.57
VPS52Q8N1B4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS52Q8N1B4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VPS52Q8N1B4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS52Q8N1B4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.58■□□□□ 0.57
VPS52Q8N1B4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS52Q8N1B4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS52Q8N1B4 AP002414.1-201ENST00000391405 1147 ntBASIC18.58■□□□□ 0.56
VPS52Q8N1B4 LINC00982-205ENST00000420957 435 ntBASIC18.58■□□□□ 0.56
VPS52Q8N1B4 CNN2P11-201ENST00000429351 262 ntBASIC18.58■□□□□ 0.56
VPS52Q8N1B4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.58■□□□□ 0.56
VPS52Q8N1B4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
VPS52Q8N1B4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS52Q8N1B4 CEND1P1-201ENST00000451006 455 ntBASIC18.58■□□□□ 0.56
VPS52Q8N1B4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.58■□□□□ 0.56
VPS52Q8N1B4 GGTLC5P-201ENST00000617623 998 ntBASIC18.58■□□□□ 0.56
VPS52Q8N1B4 AC010507.1-201ENST00000633895 436 ntBASIC18.58■□□□□ 0.56
VPS52Q8N1B4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms