Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 GPR89P-201ENST00000407924 1495 ntBASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 LYSMD4-203ENST00000378904 2122 ntBASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 AC009053.2-201ENST00000563701 2365 ntBASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 AL671883.3-201ENST00000603274 991 ntBASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 AC140113.2-201ENST00000604370 208 ntBASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 PMS2P7-201ENST00000506558 1336 ntBASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
TRIM48Q8IWZ4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.29
TRIM48Q8IWZ4 TNRC18P3-201ENST00000441896 2691 ntBASIC16.83■□□□□ 0.29
TRIM48Q8IWZ4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.83■□□□□ 0.29
TRIM48Q8IWZ4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
TRIM48Q8IWZ4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM48Q8IWZ4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
TRIM48Q8IWZ4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 RNA5SP416-201ENST00000516838 111 ntBASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 FAM197Y3-203ENST00000618346 717 ntBASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 AL805961.1-202ENST00000641562 540 ntBASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM48Q8IWZ4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 GNAS-203ENST00000306120 1878 ntBASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms