Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK2Q86Y07 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK2Q86Y07 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK2Q86Y07 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 AL591684.3-201ENST00000605187 298 ntBASIC15.86■□□□□ 0.13
VRK2Q86Y07 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK2Q86Y07 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK2Q86Y07 AC004817.3-201ENST00000602957 2129 ntBASIC15.86■□□□□ 0.13
VRK2Q86Y07 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK2Q86Y07 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK2Q86Y07 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK2Q86Y07 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
VRK2Q86Y07 AC097637.2-201ENST00000624096 1997 ntBASIC15.86■□□□□ 0.13
VRK2Q86Y07 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 MIR1224-201ENST00000408193 85 ntBASIC15.85■□□□□ 0.13
VRK2Q86Y07 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
VRK2Q86Y07 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK2Q86Y07 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.84■□□□□ 0.13
VRK2Q86Y07 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VRK2Q86Y07 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.84■□□□□ 0.13
VRK2Q86Y07 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
VRK2Q86Y07 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.84■□□□□ 0.13
VRK2Q86Y07 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.84■□□□□ 0.13
VRK2Q86Y07 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.84■□□□□ 0.13
VRK2Q86Y07 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.84■□□□□ 0.13
VRK2Q86Y07 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
VRK2Q86Y07 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.84■□□□□ 0.13
VRK2Q86Y07 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.84■□□□□ 0.13
VRK2Q86Y07 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
VRK2Q86Y07 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
VRK2Q86Y07 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK2Q86Y07 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms