Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC133963.1-201ENST00000504166 1679 ntBASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 MIR3909-201ENST00000579518 119 ntBASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13BQ7Z7G8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 FRMD8P1-201ENST00000440433 1524 ntBASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 TMEM14DP-201ENST00000422205 345 ntBASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 IGHV3-42-201ENST00000520410 361 ntBASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 AC027307.2-201ENST00000591252 911 ntBASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 ALG1L8P-201ENST00000533887 760 ntBASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 AL161645.1-201ENST00000622716 1255 ntBASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VPS13BQ7Z7G8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 IGHV3OR16-16-201ENST00000563644 343 ntBASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 MIR4538-201ENST00000581377 78 ntBASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 MIR4259-201ENST00000584466 101 ntBASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 AC008494.3-201ENST00000606615 944 ntBASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 AC004840.1-201ENST00000636359 365 ntBASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS13BQ7Z7G8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms