Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 AC116353.5-201ENST00000638148 1699 ntBASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 TMPOP1-202ENST00000424642 1267 ntBASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 AC103564.2-201ENST00000432853 1299 ntBASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 SPDYE13P-201ENST00000445314 798 ntBASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 AC109462.3-201ENST00000573934 613 ntBASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 RN7SL850P-201ENST00000579959 291 ntBASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 AC011498.5-201ENST00000592027 486 ntBASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
MRPL55Q7Z7F7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms