Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 MIR4515-201ENST00000584082 81 ntBASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 AC007064.4-201ENST00000637740 555 ntBASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 AC022211.2-201ENST00000585075 2527 ntBASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BHLHA9Q7RTU4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 AC005915.1-201ENST00000624912 2018 ntBASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 AL645728.1-201ENST00000366221 2101 ntBASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BHLHA9Q7RTU4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BHLHA9Q7RTU4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.64■□□□□ 0.42
BHLHA9Q7RTU4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.64■□□□□ 0.42
BHLHA9Q7RTU4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
BHLHA9Q7RTU4 AC105020.1-201ENST00000435356 2205 ntBASIC17.64■□□□□ 0.42
BHLHA9Q7RTU4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 AC131009.4-201ENST00000624048 1740 ntBASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 SNX33P1-201ENST00000592116 1762 ntBASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 RPSAP43-201ENST00000402237 625 ntBASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 GPX1P2-201ENST00000429271 606 ntBASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 AC074386.1-202ENST00000463561 864 ntBASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 ALG1L5P-201ENST00000482043 771 ntBASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 AP002472.1-201ENST00000577490 586 ntBASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 AL645728.2-201ENST00000641974 660 ntBASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BHLHA9Q7RTU4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms