Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP45Q70EL2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP45Q70EL2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP45Q70EL2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
USP45Q70EL2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP45Q70EL2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
USP45Q70EL2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.16■□□□□ 0.34
USP45Q70EL2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
USP45Q70EL2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.15■□□□□ 0.34
USP45Q70EL2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.15■□□□□ 0.34
USP45Q70EL2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.15■□□□□ 0.34
USP45Q70EL2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.15■□□□□ 0.34
USP45Q70EL2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 PRSS29P-201ENST00000440800 595 ntBASIC17.15■□□□□ 0.34
USP45Q70EL2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.15■□□□□ 0.34
USP45Q70EL2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.15■□□□□ 0.34
USP45Q70EL2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 AC010654.1-201ENST00000615722 808 ntBASIC17.15■□□□□ 0.34
USP45Q70EL2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.15■□□□□ 0.34
USP45Q70EL2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
USP45Q70EL2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.15■□□□□ 0.34
USP45Q70EL2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.15■□□□□ 0.34
USP45Q70EL2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
USP45Q70EL2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP45Q70EL2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
USP45Q70EL2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
USP45Q70EL2 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.14■□□□□ 0.34
USP45Q70EL2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.14■□□□□ 0.34
USP45Q70EL2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.14■□□□□ 0.33
USP45Q70EL2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
USP45Q70EL2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.14■□□□□ 0.33
USP45Q70EL2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 AC087163.2-201ENST00000457299 853 ntBASIC17.14■□□□□ 0.33
USP45Q70EL2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.14■□□□□ 0.33
USP45Q70EL2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.14■□□□□ 0.33
USP45Q70EL2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.14■□□□□ 0.33
USP45Q70EL2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.14■□□□□ 0.33
USP45Q70EL2 AC034105.1-201ENST00000563488 319 ntBASIC17.14■□□□□ 0.33
USP45Q70EL2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.14■□□□□ 0.33
USP45Q70EL2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.14■□□□□ 0.33
USP45Q70EL2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
USP45Q70EL2 AC004790.2-201ENST00000623588 572 ntBASIC17.14■□□□□ 0.33
USP45Q70EL2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.14■□□□□ 0.33
USP45Q70EL2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
USP45Q70EL2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 AL645608.8-201ENST00000606034 2086 ntBASIC17.14■□□□□ 0.33
USP45Q70EL2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP45Q70EL2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.14■□□□□ 0.33
USP45Q70EL2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
USP45Q70EL2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
USP45Q70EL2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP45Q70EL2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms