Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 AC211486.1-202ENST00000416371 468 ntBASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 AC211476.1-201ENST00000503899 468 ntBASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 MIR4469-201ENST00000583919 79 ntBASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SWSAP1Q6NVH7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 FRMD8P1-201ENST00000440433 1524 ntBASIC19■□□□□ 0.63
SWSAP1Q6NVH7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 AC004967.1-201ENST00000453589 447 ntBASIC19■□□□□ 0.63
SWSAP1Q6NVH7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 YBX1P5-201ENST00000509441 847 ntBASIC19■□□□□ 0.63
SWSAP1Q6NVH7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 AC092919.2-201ENST00000623631 1645 ntBASIC19■□□□□ 0.63
SWSAP1Q6NVH7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19■□□□□ 0.63
SWSAP1Q6NVH7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 MKNK2P1-201ENST00000437526 628 ntBASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SWSAP1Q6NVH7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 FAM58CP-201ENST00000435741 640 ntBASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 CEND1P1-201ENST00000451006 455 ntBASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms