Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 AC105021.1-202ENST00000570572 669 ntBASIC27.55■■■□□ 2
SNAPC4Q5SXM2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 AL109936.8-201ENST00000641772 604 ntBASIC27.55■■■□□ 2
SNAPC4Q5SXM2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC27.55■■■□□ 2
SNAPC4Q5SXM2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 TNXA-203ENST00000507684 2038 ntBASIC27.54■■■□□ 2
SNAPC4Q5SXM2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 CD81-207ENST00000481687 890 ntTSL 2 BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 ELK1P1-201ENST00000485699 580 ntBASIC27.54■■■□□ 2
SNAPC4Q5SXM2 FAM8A2P-201ENST00000528813 1142 ntBASIC27.54■■■□□ 2
SNAPC4Q5SXM2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 AP005482.1-201ENST00000563722 1273 ntBASIC27.54■■■□□ 2
SNAPC4Q5SXM2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 AC021097.1-201ENST00000607902 574 ntBASIC27.54■■■□□ 2
SNAPC4Q5SXM2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 AL138781.2-201ENST00000617896 1843 ntBASIC27.54■■■□□ 2
SNAPC4Q5SXM2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC27.54■■■□□ 2
SNAPC4Q5SXM2 FLJ13224-201ENST00000313737 1514 ntBASIC27.53■■■□□ 2
SNAPC4Q5SXM2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 CDK2AP2P3-201ENST00000422476 372 ntBASIC27.53■■■□□ 2
SNAPC4Q5SXM2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 RN7SL618P-201ENST00000477850 296 ntBASIC27.53■■■□□ 2
SNAPC4Q5SXM2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 MIR4538-201ENST00000581377 78 ntBASIC27.53■■■□□ 2
SNAPC4Q5SXM2 MIR6775-201ENST00000617557 69 ntBASIC27.53■■■□□ 2
SNAPC4Q5SXM2 LINC01451-201ENST00000623792 534 ntBASIC27.53■■■□□ 2
SNAPC4Q5SXM2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC27.53■■■□□ 2
SNAPC4Q5SXM2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 KRT18P34-201ENST00000488218 1270 ntBASIC27.52■■■□□ 2
SNAPC4Q5SXM2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 MNT-208ENST00000575394 606 ntTSL 4 BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 AC008735.3-201ENST00000596646 500 ntBASIC27.52■■■□□ 2
SNAPC4Q5SXM2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC27.52■■■□□ 2
SNAPC4Q5SXM2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■■□□ 2
SNAPC4Q5SXM2 OSM-203ENST00000403463 464 ntTSL 3 BASIC27.51■■■□□ 2
SNAPC4Q5SXM2 AC114501.2-201ENST00000439631 535 ntBASIC27.51■■■□□ 2
SNAPC4Q5SXM2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC27.51■■■□□ 2
SNAPC4Q5SXM2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC27.51■■■□□ 2
SNAPC4Q5SXM2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC27.51■■■□□ 2
SNAPC4Q5SXM2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC27.51■■■□□ 2
SNAPC4Q5SXM2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC27.51■■■□□ 2
SNAPC4Q5SXM2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC27.51■■■□□ 2
SNAPC4Q5SXM2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC27.51■■■□□ 2
SNAPC4Q5SXM2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC27.51■■■□□ 2
SNAPC4Q5SXM2 CTBP2P3-201ENST00000585629 1255 ntBASIC27.51■■■□□ 2
SNAPC4Q5SXM2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SNAPC4Q5SXM2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC27.51■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms