Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VARS2Q5ST30 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 ADH5P3-201ENST00000433842 1137 ntBASIC18.07■□□□□ 0.48
VARS2Q5ST30 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 AC005412.3-201ENST00000580309 715 ntBASIC18.07■□□□□ 0.48
VARS2Q5ST30 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
VARS2Q5ST30 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VARS2Q5ST30 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 AC018470.1-201ENST00000624790 3129 ntBASIC18.06■□□□□ 0.48
VARS2Q5ST30 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 AL121761.2-201ENST00000598007 1648 ntBASIC18.06■□□□□ 0.48
VARS2Q5ST30 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 AC004461.1-201ENST00000412461 403 ntBASIC18.06■□□□□ 0.48
VARS2Q5ST30 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 AC011467.4-201ENST00000594891 528 ntBASIC18.06■□□□□ 0.48
VARS2Q5ST30 AC004835.2-201ENST00000603762 682 ntBASIC18.06■□□□□ 0.48
VARS2Q5ST30 AC099522.2-201ENST00000607001 744 ntBASIC18.06■□□□□ 0.48
VARS2Q5ST30 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VARS2Q5ST30 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.06■□□□□ 0.48
VARS2Q5ST30 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
VARS2Q5ST30 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VARS2Q5ST30 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VARS2Q5ST30 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VARS2Q5ST30 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.05■□□□□ 0.48
VARS2Q5ST30 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
VARS2Q5ST30 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VARS2Q5ST30 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VARS2Q5ST30 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
VARS2Q5ST30 HMGA1P7-201ENST00000406908 502 ntBASIC18.05■□□□□ 0.48
VARS2Q5ST30 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.05■□□□□ 0.48
VARS2Q5ST30 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.05■□□□□ 0.48
VARS2Q5ST30 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VARS2Q5ST30 HLA-J-203ENST00000494367 1087 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms