Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
COBLL1Q53SF7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COBLL1Q53SF7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COBLL1Q53SF7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COBLL1Q53SF7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
COBLL1Q53SF7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.77■□□□□ 0.59
COBLL1Q53SF7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COBLL1Q53SF7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COBLL1Q53SF7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 AC139887.3-201ENST00000568585 713 ntBASIC18.76■□□□□ 0.59
COBLL1Q53SF7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COBLL1Q53SF7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 AC006277.1-201ENST00000624348 1610 ntBASIC18.75■□□□□ 0.59
COBLL1Q53SF7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 AKR1C7P-201ENST00000305623 895 ntBASIC18.75■□□□□ 0.59
COBLL1Q53SF7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 AC091304.2-201ENST00000564639 760 ntBASIC18.75■□□□□ 0.59
COBLL1Q53SF7 MTDHP4-201ENST00000600287 670 ntBASIC18.75■□□□□ 0.59
COBLL1Q53SF7 AC008608.2-201ENST00000606089 416 ntBASIC18.75■□□□□ 0.59
COBLL1Q53SF7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.75■□□□□ 0.59
COBLL1Q53SF7 AF228730.7-201ENST00000641842 219 ntBASIC18.75■□□□□ 0.59
COBLL1Q53SF7 TOP3BP1-201ENST00000420768 1380 ntBASIC18.75■□□□□ 0.59
COBLL1Q53SF7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.75■□□□□ 0.59
COBLL1Q53SF7 PCDHB19P-201ENST00000570871 2371 ntBASIC18.75■□□□□ 0.59
COBLL1Q53SF7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 AC006538.1-201ENST00000567905 1585 ntBASIC18.74■□□□□ 0.59
COBLL1Q53SF7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COBLL1Q53SF7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms