Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 KLF4P1-201ENST00000412782 1185 ntBASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 DUX4L26-201ENST00000489078 1255 ntBASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 AL136038.3-201ENST00000561909 1096 ntBASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 GPR89P-201ENST00000407924 1495 ntBASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP6AP1LQ52LC2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP6AP1LQ52LC2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP6AP1LQ52LC2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ATP6AP1LQ52LC2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.58■□□□□ 0.25
ATP6AP1LQ52LC2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.58■□□□□ 0.25
ATP6AP1LQ52LC2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.58■□□□□ 0.25
ATP6AP1LQ52LC2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.58■□□□□ 0.25
ATP6AP1LQ52LC2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP6AP1LQ52LC2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.58■□□□□ 0.25
ATP6AP1LQ52LC2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP6AP1LQ52LC2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 FRMD8P1-201ENST00000440433 1524 ntBASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ATP6AP1LQ52LC2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms