Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDR1Q08345 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
DDR1Q08345 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.05■□□□□ 0.96
DDR1Q08345 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
DDR1Q08345 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC21.05■□□□□ 0.96
DDR1Q08345 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.05■□□□□ 0.96
DDR1Q08345 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.05■□□□□ 0.96
DDR1Q08345 IGHV3-72-202ENST00000621503 303 ntBASIC21.05■□□□□ 0.96
DDR1Q08345 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDR1Q08345 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDR1Q08345 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
DDR1Q08345 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDR1Q08345 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDR1Q08345 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
DDR1Q08345 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.05■□□□□ 0.96
DDR1Q08345 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDR1Q08345 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDR1Q08345 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDR1Q08345 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDR1Q08345 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.04■□□□□ 0.96
DDR1Q08345 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDR1Q08345 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDR1Q08345 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.04■□□□□ 0.96
DDR1Q08345 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.04■□□□□ 0.96
DDR1Q08345 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.04■□□□□ 0.96
DDR1Q08345 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDR1Q08345 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.04■□□□□ 0.96
DDR1Q08345 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.04■□□□□ 0.96
DDR1Q08345 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.04■□□□□ 0.96
DDR1Q08345 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.04■□□□□ 0.96
DDR1Q08345 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
DDR1Q08345 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
DDR1Q08345 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.04■□□□□ 0.96
DDR1Q08345 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
DDR1Q08345 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.04■□□□□ 0.96
DDR1Q08345 TEX28P1-201ENST00000613479 1221 ntBASIC21.04■□□□□ 0.96
DDR1Q08345 TEX28P2-201ENST00000617764 1221 ntBASIC21.04■□□□□ 0.96
DDR1Q08345 AC004840.1-201ENST00000636359 365 ntBASIC21.04■□□□□ 0.96
DDR1Q08345 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDR1Q08345 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDR1Q08345 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDR1Q08345 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDR1Q08345 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.04■□□□□ 0.96
DDR1Q08345 LINC00895-201ENST00000629028 1637 ntBASIC21.04■□□□□ 0.96
DDR1Q08345 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.04■□□□□ 0.96
DDR1Q08345 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDR1Q08345 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.04■□□□□ 0.96
DDR1Q08345 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDR1Q08345 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
DDR1Q08345 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDR1Q08345 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.03■□□□□ 0.96
DDR1Q08345 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.03■□□□□ 0.96
DDR1Q08345 AC138969.3-201ENST00000546612 1459 ntBASIC21.03■□□□□ 0.96
DDR1Q08345 AC138932.2-201ENST00000548268 1459 ntBASIC21.03■□□□□ 0.96
DDR1Q08345 AC126755.4-201ENST00000549796 1459 ntBASIC21.03■□□□□ 0.96
DDR1Q08345 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDR1Q08345 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDR1Q08345 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC21.03■□□□□ 0.96
DDR1Q08345 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDR1Q08345 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDR1Q08345 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDR1Q08345 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDR1Q08345 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDR1Q08345 GPR53P-205ENST00000457298 1084 ntBASIC21.03■□□□□ 0.96
DDR1Q08345 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.03■□□□□ 0.96
DDR1Q08345 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC21.03■□□□□ 0.96
DDR1Q08345 IFT20-216ENST00000588477 774 ntTSL 5 BASIC21.03■□□□□ 0.96
DDR1Q08345 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDR1Q08345 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDR1Q08345 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDR1Q08345 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDR1Q08345 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
DDR1Q08345 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
DDR1Q08345 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDR1Q08345 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDR1Q08345 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.02■□□□□ 0.96
DDR1Q08345 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DDR1Q08345 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.02■□□□□ 0.96
DDR1Q08345 AC007541.1-201ENST00000570282 1469 ntBASIC21.02■□□□□ 0.96
DDR1Q08345 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.02■□□□□ 0.96
DDR1Q08345 AL138781.2-201ENST00000617896 1843 ntBASIC21.02■□□□□ 0.96
DDR1Q08345 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
DDR1Q08345 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
DDR1Q08345 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDR1Q08345 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
DDR1Q08345 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
DDR1Q08345 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDR1Q08345 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDR1Q08345 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDR1Q08345 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.02■□□□□ 0.96
DDR1Q08345 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.02■□□□□ 0.96
DDR1Q08345 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.02■□□□□ 0.96
DDR1Q08345 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.02■□□□□ 0.96
DDR1Q08345 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC21.02■□□□□ 0.96
DDR1Q08345 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.02■□□□□ 0.96
DDR1Q08345 MPDU1-223ENST00000582151 728 ntBASIC21.02■□□□□ 0.96
DDR1Q08345 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
DDR1Q08345 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDR1Q08345 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.02■□□□□ 0.96
DDR1Q08345 AC090164.3-201ENST00000610780 2143 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms