Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.87■□□□□ 0.45
IRX4P78413 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.87■□□□□ 0.45
IRX4P78413 YBX2P1-201ENST00000394192 760 ntBASIC17.87■□□□□ 0.45
IRX4P78413 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.87■□□□□ 0.45
IRX4P78413 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.87■□□□□ 0.45
IRX4P78413 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.87■□□□□ 0.45
IRX4P78413 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 RNA5SP415-201ENST00000517246 115 ntBASIC17.87■□□□□ 0.45
IRX4P78413 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.87■□□□□ 0.45
IRX4P78413 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 Z83851.2-201ENST00000609564 659 ntBASIC17.87■□□□□ 0.45
IRX4P78413 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
IRX4P78413 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 AC022898.2-201ENST00000616822 1312 ntBASIC17.87■□□□□ 0.45
IRX4P78413 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
IRX4P78413 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
IRX4P78413 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
IRX4P78413 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
IRX4P78413 AC132938.6-201ENST00000623828 1655 ntBASIC17.87■□□□□ 0.45
IRX4P78413 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.86■□□□□ 0.45
IRX4P78413 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
IRX4P78413 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.86■□□□□ 0.45
IRX4P78413 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
IRX4P78413 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.86■□□□□ 0.45
IRX4P78413 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
IRX4P78413 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
IRX4P78413 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
IRX4P78413 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.86■□□□□ 0.45
IRX4P78413 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.86■□□□□ 0.45
IRX4P78413 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.86■□□□□ 0.45
IRX4P78413 OR7E14P-202ENST00000530490 1290 ntBASIC17.86■□□□□ 0.45
IRX4P78413 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.86■□□□□ 0.45
IRX4P78413 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.86■□□□□ 0.45
IRX4P78413 AC079781.4-201ENST00000641908 219 ntBASIC17.86■□□□□ 0.45
IRX4P78413 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.86■□□□□ 0.45
IRX4P78413 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
IRX4P78413 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
IRX4P78413 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
IRX4P78413 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.86■□□□□ 0.45
IRX4P78413 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.86■□□□□ 0.45
IRX4P78413 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.86■□□□□ 0.45
IRX4P78413 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IRX4P78413 CROCCP2-202ENST00000412962 2773 ntBASIC17.85■□□□□ 0.45
IRX4P78413 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
IRX4P78413 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.85■□□□□ 0.45
IRX4P78413 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IRX4P78413 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IRX4P78413 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
IRX4P78413 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IRX4P78413 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.85■□□□□ 0.45
IRX4P78413 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
IRX4P78413 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.85■□□□□ 0.45
IRX4P78413 ABCD1P5-201ENST00000445663 754 ntBASIC17.85■□□□□ 0.45
IRX4P78413 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.85■□□□□ 0.45
IRX4P78413 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
IRX4P78413 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.85■□□□□ 0.45
IRX4P78413 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IRX4P78413 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
IRX4P78413 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.85■□□□□ 0.45
IRX4P78413 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.85■□□□□ 0.45
IRX4P78413 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.85■□□□□ 0.45
IRX4P78413 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
IRX4P78413 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IRX4P78413 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.85■□□□□ 0.45
IRX4P78413 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
IRX4P78413 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.85■□□□□ 0.45
IRX4P78413 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IRX4P78413 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms