Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEP78395 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PRAMEP78395 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PRAMEP78395 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PRAMEP78395 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEP78395 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
PRAMEP78395 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PRAMEP78395 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.31■□□□□ 0.36
PRAMEP78395 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.31■□□□□ 0.36
PRAMEP78395 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEP78395 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEP78395 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
PRAMEP78395 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.31■□□□□ 0.36
PRAMEP78395 SPDYE21P-201ENST00000413323 827 ntBASIC17.31■□□□□ 0.36
PRAMEP78395 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PRAMEP78395 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.31■□□□□ 0.36
PRAMEP78395 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEP78395 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEP78395 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.31■□□□□ 0.36
PRAMEP78395 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.31■□□□□ 0.36
PRAMEP78395 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.31■□□□□ 0.36
PRAMEP78395 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEP78395 AC148477.5-201ENST00000625164 1645 ntBASIC17.31■□□□□ 0.36
PRAMEP78395 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 EGFEM1P-202ENST00000431685 1563 ntBASIC17.31■□□□□ 0.36
PRAMEP78395 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PRAMEP78395 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PRAMEP78395 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEP78395 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.31■□□□□ 0.36
PRAMEP78395 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.3■□□□□ 0.36
PRAMEP78395 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PRAMEP78395 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.3■□□□□ 0.36
PRAMEP78395 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.3■□□□□ 0.36
PRAMEP78395 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PRAMEP78395 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.3■□□□□ 0.36
PRAMEP78395 NUS1P1-201ENST00000446295 882 ntBASIC17.3■□□□□ 0.36
PRAMEP78395 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.3■□□□□ 0.36
PRAMEP78395 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.3■□□□□ 0.36
PRAMEP78395 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PRAMEP78395 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.3■□□□□ 0.36
PRAMEP78395 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PRAMEP78395 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.3■□□□□ 0.36
PRAMEP78395 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEP78395 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PRAMEP78395 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEP78395 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.29■□□□□ 0.36
PRAMEP78395 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEP78395 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEP78395 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEP78395 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.29■□□□□ 0.36
PRAMEP78395 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEP78395 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEP78395 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEP78395 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEP78395 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms