Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.18■□□□□ 0.82
CNTNAP1P78357 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.18■□□□□ 0.82
CNTNAP1P78357 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.18■□□□□ 0.82
CNTNAP1P78357 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.18■□□□□ 0.82
CNTNAP1P78357 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CNTNAP1P78357 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CNTNAP1P78357 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CNTNAP1P78357 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.18■□□□□ 0.82
CNTNAP1P78357 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP1P78357 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP1P78357 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP1P78357 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP1P78357 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP1P78357 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP1P78357 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CNTNAP1P78357 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.17■□□□□ 0.82
CNTNAP1P78357 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP1P78357 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CNTNAP1P78357 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP1P78357 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP1P78357 FAM86MP-201ENST00000340703 885 ntBASIC20.17■□□□□ 0.82
CNTNAP1P78357 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP1P78357 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP1P78357 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.17■□□□□ 0.82
CNTNAP1P78357 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP1P78357 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CNTNAP1P78357 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CNTNAP1P78357 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.17■□□□□ 0.82
CNTNAP1P78357 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.17■□□□□ 0.82
CNTNAP1P78357 MIR4453-201ENST00000584019 89 ntBASIC20.17■□□□□ 0.82
CNTNAP1P78357 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.17■□□□□ 0.82
CNTNAP1P78357 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.17■□□□□ 0.82
CNTNAP1P78357 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP1P78357 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.17■□□□□ 0.82
CNTNAP1P78357 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP1P78357 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.17■□□□□ 0.82
CNTNAP1P78357 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CNTNAP1P78357 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP1P78357 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP1P78357 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP1P78357 AL355312.1-201ENST00000407115 2176 ntBASIC20.16■□□□□ 0.82
CNTNAP1P78357 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP1P78357 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP1P78357 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP1P78357 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 AC132938.2-201ENST00000579188 680 ntBASIC20.16■□□□□ 0.82
CNTNAP1P78357 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 AL591163.1-201ENST00000641757 987 ntBASIC20.16■□□□□ 0.82
CNTNAP1P78357 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 AC012569.1-201ENST00000591191 1524 ntBASIC20.16■□□□□ 0.82
CNTNAP1P78357 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP1P78357 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP1P78357 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
CNTNAP1P78357 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP1P78357 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP1P78357 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
CNTNAP1P78357 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.15■□□□□ 0.82
CNTNAP1P78357 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP1P78357 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CNTNAP1P78357 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.15■□□□□ 0.82
CNTNAP1P78357 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP1P78357 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP1P78357 HAUS4P1-201ENST00000406739 1145 ntBASIC20.15■□□□□ 0.82
CNTNAP1P78357 AL353779.1-201ENST00000434793 351 ntBASIC20.15■□□□□ 0.82
CNTNAP1P78357 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.15■□□□□ 0.82
CNTNAP1P78357 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP1P78357 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP1P78357 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.15■□□□□ 0.82
CNTNAP1P78357 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP1P78357 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.15■□□□□ 0.82
CNTNAP1P78357 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP1P78357 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP1P78357 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CNTNAP1P78357 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms