Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.25□□□□□ -0.45
UBE2D3P61077 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D3P61077 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.25□□□□□ -0.45
UBE2D3P61077 LINC02012-201ENST00000608206 1725 ntBASIC12.25□□□□□ -0.45
UBE2D3P61077 AC093525.9-201ENST00000624961 1746 ntBASIC12.25□□□□□ -0.45
UBE2D3P61077 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D3P61077 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D3P61077 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D3P61077 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D3P61077 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D3P61077 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D3P61077 AC060834.1-201ENST00000443027 2032 ntBASIC12.25□□□□□ -0.45
UBE2D3P61077 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D3P61077 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.25□□□□□ -0.45
UBE2D3P61077 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBE2D3P61077 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
UBE2D3P61077 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
UBE2D3P61077 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.24□□□□□ -0.45
UBE2D3P61077 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.24□□□□□ -0.45
UBE2D3P61077 AC103564.2-201ENST00000432853 1299 ntBASIC12.24□□□□□ -0.45
UBE2D3P61077 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
UBE2D3P61077 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.24□□□□□ -0.45
UBE2D3P61077 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.24□□□□□ -0.45
UBE2D3P61077 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.24□□□□□ -0.45
UBE2D3P61077 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.24□□□□□ -0.45
UBE2D3P61077 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.24□□□□□ -0.45
UBE2D3P61077 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
UBE2D3P61077 AC111152.3-201ENST00000569699 673 ntBASIC12.24□□□□□ -0.45
UBE2D3P61077 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
UBE2D3P61077 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.24□□□□□ -0.45
UBE2D3P61077 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
UBE2D3P61077 AC124864.1-201ENST00000623408 392 ntBASIC12.24□□□□□ -0.45
UBE2D3P61077 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.24□□□□□ -0.45
UBE2D3P61077 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
UBE2D3P61077 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D3P61077 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
UBE2D3P61077 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.24□□□□□ -0.45
UBE2D3P61077 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.23□□□□□ -0.45
UBE2D3P61077 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.23□□□□□ -0.45
UBE2D3P61077 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.23□□□□□ -0.45
UBE2D3P61077 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 AC046185.3-201ENST00000623228 1824 ntBASIC12.23□□□□□ -0.45
UBE2D3P61077 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
UBE2D3P61077 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
UBE2D3P61077 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
UBE2D3P61077 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
UBE2D3P61077 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.23□□□□□ -0.45
UBE2D3P61077 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
UBE2D3P61077 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
UBE2D3P61077 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D3P61077 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
UBE2D3P61077 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms