Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 DDX43P3-201ENST00000441064 443 ntBASIC12.9□□□□□ -0.34
HIST1H2BDP58876 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 AL109954.1-202ENST00000564051 2148 ntBASIC12.9□□□□□ -0.34
HIST1H2BDP58876 MIR6084-201ENST00000622012 110 ntBASIC12.9□□□□□ -0.34
HIST1H2BDP58876 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H2BDP58876 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
HIST1H2BDP58876 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
HIST1H2BDP58876 SSR4P1-203ENST00000599569 2260 ntBASIC12.9□□□□□ -0.35
HIST1H2BDP58876 AC009090.5-201ENST00000624886 2285 ntBASIC12.9□□□□□ -0.35
HIST1H2BDP58876 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 LINC00552-201ENST00000625151 2579 ntBASIC12.89□□□□□ -0.35
HIST1H2BDP58876 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 AC026396.1-201ENST00000419388 421 ntBASIC12.89□□□□□ -0.35
HIST1H2BDP58876 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 AC024257.2-201ENST00000549699 147 ntBASIC12.89□□□□□ -0.35
HIST1H2BDP58876 HSD17B1P1-201ENST00000590052 955 ntBASIC12.89□□□□□ -0.35
HIST1H2BDP58876 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H2BDP58876 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms