Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLDN20P56880 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN20P56880 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN20P56880 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CLDN20P56880 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CLDN20P56880 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN20P56880 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
CLDN20P56880 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLDN20P56880 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CLDN20P56880 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN20P56880 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN20P56880 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN20P56880 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CLDN20P56880 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN20P56880 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN20P56880 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN20P56880 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN20P56880 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN20P56880 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN20P56880 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 KRT18P67-201ENST00000432816 1264 ntBASIC15.75■□□□□ 0.11
CLDN20P56880 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN20P56880 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN20P56880 AC073648.2-201ENST00000510116 352 ntBASIC15.75■□□□□ 0.11
CLDN20P56880 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CLDN20P56880 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN20P56880 STK25P1-201ENST00000585406 838 ntBASIC15.75■□□□□ 0.11
CLDN20P56880 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN20P56880 AC073592.4-201ENST00000623827 446 ntBASIC15.75■□□□□ 0.11
CLDN20P56880 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN20P56880 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CLDN20P56880 AC148477.5-201ENST00000625164 1645 ntBASIC15.75■□□□□ 0.11
CLDN20P56880 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN20P56880 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN20P56880 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN20P56880 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN20P56880 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CLDN20P56880 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN20P56880 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN20P56880 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN20P56880 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CLDN20P56880 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CLDN20P56880 AC003669.1-201ENST00000334569 611 ntBASIC15.74■□□□□ 0.11
CLDN20P56880 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN20P56880 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN20P56880 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN20P56880 AF186996.4-201ENST00000467186 377 ntBASIC15.74■□□□□ 0.11
CLDN20P56880 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN20P56880 LINC01451-201ENST00000623792 534 ntBASIC15.74■□□□□ 0.11
CLDN20P56880 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN20P56880 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN20P56880 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CLDN20P56880 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CLDN20P56880 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 SIGLEC16-201ENST00000599858 1437 ntBASIC15.74■□□□□ 0.11
CLDN20P56880 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CLDN20P56880 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN20P56880 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.74■□□□□ 0.11
CLDN20P56880 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
CLDN20P56880 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN20P56880 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms