Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RCN1P1-201ENST00000400413 996 ntBASIC16.85■□□□□ 0.29
PKNOX1P55347 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
PKNOX1P55347 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.85■□□□□ 0.29
PKNOX1P55347 VENTXP7-201ENST00000475503 772 ntBASIC16.85■□□□□ 0.29
PKNOX1P55347 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.85■□□□□ 0.29
PKNOX1P55347 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
PKNOX1P55347 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.85■□□□□ 0.29
PKNOX1P55347 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.85■□□□□ 0.29
PKNOX1P55347 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.85■□□□□ 0.29
PKNOX1P55347 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PKNOX1P55347 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.85■□□□□ 0.29
PKNOX1P55347 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.85■□□□□ 0.29
PKNOX1P55347 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 AL353593.2-201ENST00000602529 1483 ntBASIC16.85■□□□□ 0.29
PKNOX1P55347 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PKNOX1P55347 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PKNOX1P55347 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
PKNOX1P55347 RNF216P1-203ENST00000404404 2427 ntBASIC16.85■□□□□ 0.29
PKNOX1P55347 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PKNOX1P55347 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.84■□□□□ 0.29
PKNOX1P55347 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.84■□□□□ 0.29
PKNOX1P55347 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.84■□□□□ 0.29
PKNOX1P55347 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PKNOX1P55347 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.84■□□□□ 0.29
PKNOX1P55347 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PKNOX1P55347 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.84■□□□□ 0.29
PKNOX1P55347 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PKNOX1P55347 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.84■□□□□ 0.29
PKNOX1P55347 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.84■□□□□ 0.29
PKNOX1P55347 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.84■□□□□ 0.29
PKNOX1P55347 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.84■□□□□ 0.29
PKNOX1P55347 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.84■□□□□ 0.29
PKNOX1P55347 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.84■□□□□ 0.29
PKNOX1P55347 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PKNOX1P55347 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.84■□□□□ 0.29
PKNOX1P55347 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.84■□□□□ 0.29
PKNOX1P55347 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 AC092053.1-201ENST00000605787 1936 ntBASIC16.84■□□□□ 0.29
PKNOX1P55347 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.84■□□□□ 0.29
PKNOX1P55347 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.84■□□□□ 0.29
PKNOX1P55347 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.84■□□□□ 0.29
PKNOX1P55347 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PKNOX1P55347 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
PKNOX1P55347 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PKNOX1P55347 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.83■□□□□ 0.28
PKNOX1P55347 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
PKNOX1P55347 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.83■□□□□ 0.28
PKNOX1P55347 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PKNOX1P55347 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.83■□□□□ 0.28
PKNOX1P55347 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.83■□□□□ 0.28
PKNOX1P55347 EGFEM1P-202ENST00000431685 1563 ntBASIC16.83■□□□□ 0.28
PKNOX1P55347 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.83■□□□□ 0.28
PKNOX1P55347 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.83■□□□□ 0.28
PKNOX1P55347 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PKNOX1P55347 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms