Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC17.03■□□□□ 0.32
NUBP1P53384 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.03■□□□□ 0.32
NUBP1P53384 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.03■□□□□ 0.32
NUBP1P53384 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NUBP1P53384 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.03■□□□□ 0.32
NUBP1P53384 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUBP1P53384 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NUBP1P53384 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC17.03■□□□□ 0.32
NUBP1P53384 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.03■□□□□ 0.32
NUBP1P53384 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.03■□□□□ 0.32
NUBP1P53384 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.03■□□□□ 0.32
NUBP1P53384 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NUBP1P53384 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.03■□□□□ 0.32
NUBP1P53384 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUBP1P53384 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC17.03■□□□□ 0.32
NUBP1P53384 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.03■□□□□ 0.32
NUBP1P53384 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.03■□□□□ 0.32
NUBP1P53384 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NUBP1P53384 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NUBP1P53384 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.03■□□□□ 0.32
NUBP1P53384 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUBP1P53384 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUBP1P53384 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.03■□□□□ 0.32
NUBP1P53384 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUBP1P53384 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.03■□□□□ 0.32
NUBP1P53384 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUBP1P53384 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NUBP1P53384 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NUBP1P53384 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NUBP1P53384 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NUBP1P53384 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUBP1P53384 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUBP1P53384 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUBP1P53384 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUBP1P53384 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUBP1P53384 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUBP1P53384 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NUBP1P53384 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NUBP1P53384 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NUBP1P53384 FAM86MP-201ENST00000340703 885 ntBASIC17.02■□□□□ 0.32
NUBP1P53384 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NUBP1P53384 AL162253.1-201ENST00000443792 758 ntTSL 3 BASIC17.02■□□□□ 0.32
NUBP1P53384 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NUBP1P53384 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.02■□□□□ 0.32
NUBP1P53384 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.02■□□□□ 0.32
NUBP1P53384 AC093004.1-201ENST00000508850 424 ntBASIC17.02■□□□□ 0.32
NUBP1P53384 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.02■□□□□ 0.32
NUBP1P53384 ZNF890P-202ENST00000530367 1156 ntBASIC17.02■□□□□ 0.32
NUBP1P53384 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.02■□□□□ 0.32
NUBP1P53384 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.02■□□□□ 0.32
NUBP1P53384 RARRES2P9-201ENST00000565168 469 ntBASIC17.02■□□□□ 0.32
NUBP1P53384 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.02■□□□□ 0.32
NUBP1P53384 AC011458.1-201ENST00000604034 617 ntBASIC17.02■□□□□ 0.32
NUBP1P53384 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.02■□□□□ 0.32
NUBP1P53384 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.02■□□□□ 0.32
NUBP1P53384 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.02■□□□□ 0.32
NUBP1P53384 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.02■□□□□ 0.32
NUBP1P53384 SPTSSB-204ENST00000617024 1292 ntBASIC17.02■□□□□ 0.32
NUBP1P53384 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.02■□□□□ 0.32
NUBP1P53384 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.02■□□□□ 0.32
NUBP1P53384 COX11-210ENST00000639671 696 ntBASIC17.02■□□□□ 0.32
NUBP1P53384 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.02■□□□□ 0.32
NUBP1P53384 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NUBP1P53384 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NUBP1P53384 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.02■□□□□ 0.31
NUBP1P53384 AL161938.1-201ENST00000569833 2180 ntBASIC17.02■□□□□ 0.31
NUBP1P53384 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NUBP1P53384 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NUBP1P53384 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUBP1P53384 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NUBP1P53384 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUBP1P53384 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUBP1P53384 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUBP1P53384 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.01■□□□□ 0.31
NUBP1P53384 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUBP1P53384 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUBP1P53384 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.01■□□□□ 0.31
NUBP1P53384 AC092506.1-202ENST00000401022 528 ntBASIC17.01■□□□□ 0.31
NUBP1P53384 HAUS4P1-201ENST00000406739 1145 ntBASIC17.01■□□□□ 0.31
NUBP1P53384 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.01■□□□□ 0.31
NUBP1P53384 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.01■□□□□ 0.31
NUBP1P53384 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC17.01■□□□□ 0.31
NUBP1P53384 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.01■□□□□ 0.31
NUBP1P53384 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.01■□□□□ 0.31
NUBP1P53384 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUBP1P53384 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.01■□□□□ 0.31
NUBP1P53384 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC17.01■□□□□ 0.31
NUBP1P53384 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC17.01■□□□□ 0.31
NUBP1P53384 MIR4760-201ENST00000585040 80 ntBASIC17.01■□□□□ 0.31
NUBP1P53384 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.01■□□□□ 0.31
NUBP1P53384 AC008738.7-201ENST00000609744 511 ntBASIC17.01■□□□□ 0.31
NUBP1P53384 AC133552.6-201ENST00000613406 534 ntBASIC17.01■□□□□ 0.31
NUBP1P53384 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.01■□□□□ 0.31
NUBP1P53384 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUBP1P53384 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NUBP1P53384 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NUBP1P53384 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUBP1P53384 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NUBP1P53384 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NUBP1P53384 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms