Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI2P48788 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI2P48788 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.29■□□□□ 0.84
TNNI2P48788 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.29■□□□□ 0.84
TNNI2P48788 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.29■□□□□ 0.84
TNNI2P48788 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.29■□□□□ 0.84
TNNI2P48788 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.29■□□□□ 0.84
TNNI2P48788 AL135744.1-201ENST00000565098 629 ntBASIC20.29■□□□□ 0.84
TNNI2P48788 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.29■□□□□ 0.84
TNNI2P48788 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.29■□□□□ 0.84
TNNI2P48788 MIR4745-201ENST00000577608 62 ntBASIC20.29■□□□□ 0.84
TNNI2P48788 AC005412.3-201ENST00000580309 715 ntBASIC20.29■□□□□ 0.84
TNNI2P48788 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI2P48788 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI2P48788 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI2P48788 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.29■□□□□ 0.84
TNNI2P48788 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.29■□□□□ 0.84
TNNI2P48788 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI2P48788 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TNNI2P48788 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI2P48788 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI2P48788 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI2P48788 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI2P48788 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.28■□□□□ 0.84
TNNI2P48788 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TNNI2P48788 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
TNNI2P48788 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI2P48788 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI2P48788 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI2P48788 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.28■□□□□ 0.84
TNNI2P48788 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.28■□□□□ 0.84
TNNI2P48788 AC243562.1-201ENST00000560672 389 ntBASIC20.28■□□□□ 0.84
TNNI2P48788 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI2P48788 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.28■□□□□ 0.84
TNNI2P48788 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.28■□□□□ 0.84
TNNI2P48788 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI2P48788 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI2P48788 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TNNI2P48788 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.27■□□□□ 0.84
TNNI2P48788 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.27■□□□□ 0.84
TNNI2P48788 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI2P48788 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI2P48788 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI2P48788 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI2P48788 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.27■□□□□ 0.84
TNNI2P48788 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI2P48788 PMS2P4-201ENST00000412466 1052 ntBASIC20.27■□□□□ 0.84
TNNI2P48788 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.27■□□□□ 0.84
TNNI2P48788 AC093214.1-201ENST00000511688 1107 ntBASIC20.27■□□□□ 0.84
TNNI2P48788 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.27■□□□□ 0.84
TNNI2P48788 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.27■□□□□ 0.84
TNNI2P48788 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.27■□□□□ 0.84
TNNI2P48788 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI2P48788 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI2P48788 AJ011932.1-201ENST00000621707 465 ntBASIC20.27■□□□□ 0.84
TNNI2P48788 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.27■□□□□ 0.84
TNNI2P48788 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI2P48788 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.27■□□□□ 0.84
TNNI2P48788 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI2P48788 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
TNNI2P48788 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
TNNI2P48788 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TNNI2P48788 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TNNI2P48788 AC012317.2-201ENST00000623305 2251 ntBASIC20.27■□□□□ 0.83
TNNI2P48788 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.27■□□□□ 0.83
TNNI2P48788 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.26■□□□□ 0.83
TNNI2P48788 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI2P48788 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI2P48788 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI2P48788 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.26■□□□□ 0.83
TNNI2P48788 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI2P48788 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.26■□□□□ 0.83
TNNI2P48788 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI2P48788 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI2P48788 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TNNI2P48788 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI2P48788 AL512356.2-201ENST00000546955 174 ntBASIC20.26■□□□□ 0.83
TNNI2P48788 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.26■□□□□ 0.83
TNNI2P48788 DUX4L27-201ENST00000554796 1261 ntBASIC20.26■□□□□ 0.83
TNNI2P48788 DUX4L17-201ENST00000557360 1267 ntBASIC20.26■□□□□ 0.83
TNNI2P48788 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.26■□□□□ 0.83
TNNI2P48788 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI2P48788 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI2P48788 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI2P48788 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TNNI2P48788 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.26■□□□□ 0.83
TNNI2P48788 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.26■□□□□ 0.83
TNNI2P48788 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI2P48788 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.26■□□□□ 0.83
TNNI2P48788 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI2P48788 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.26■□□□□ 0.83
TNNI2P48788 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI2P48788 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.26■□□□□ 0.83
TNNI2P48788 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.25■□□□□ 0.83
TNNI2P48788 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNNI2P48788 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TNNI2P48788 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNNI2P48788 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.25■□□□□ 0.83
TNNI2P48788 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNNI2P48788 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms